RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-211ENST00000531653 LHX3Q9UBR4 397 aa11.2□□□□□ -0.62
PSMC3-211ENST00000531653 ATP8A1Q9Y2Q0 1164 aa11.2□□□□□ -0.62
PSMC3-211ENST00000531653 ZNF469Q96JG9 3925 aaPredicted RBP11.2□□□□□ -0.62
PSMC3-211ENST00000531653 TRIM49BA6NDI0 452 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ZSCAN5CA6NGD5 496 aaPredicted RBP11.19□□□□□ -0.62
PSMC3-211ENST00000531653 A8MU76 341 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 P4HA2O15460 535 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 MED7O43513 233 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 KDELR3O43731 214 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 SRGAP2O75044 1071 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 LETM1O95202 739 aaPredicted RBP11.19□□□□□ -0.62
PSMC3-211ENST00000531653 IGSF6O95976 241 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 F9P00740 461 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ERBB2P04626 1255 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 HOXB4P17483 251 aaPredicted RBP11.19□□□□□ -0.62
PSMC3-211ENST00000531653 GARSP41250 739 aaKnown RBP11.19□□□□□ -0.62
PSMC3-211ENST00000531653 MAPKAPK2P49137 400 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ITGA1P56199 1179 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 PEX6Q13608 980 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 INO80DQ53TQ3 878 aaPredicted RBP11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ZNF658Q5TYW1 1059 aaPredicted RBP11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ERAP2Q6P179 960 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 BRAT1Q6PJG6 821 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 SLC30A9Q6PML9 568 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ZNF761Q86XN6 746 aaPredicted RBP11.19□□□□□ -0.62
PSMC3-211ENST00000531653 OR10G6Q8NH81 332 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 SLC37A2Q8TED4 501 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 SEC14L1Q92503 715 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ANP32EQ9BTT0 268 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 MFRPQ9BY79 579 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 BRD8Q9H0E9 1235 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ING2Q9H160 280 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 SUV39H2Q9H5I1 410 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 ACP6Q9NPH0 428 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 TMEM248Q9NWD8 314 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 LUZP4Q9P127 313 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 SLC17A4Q9Y2C5 497 aa11.19□□□□□ -0.62
PSMC3-211ENST00000531653 MDC1Q14676 2089 aaKnown RBP11.19□□□□□ -0.62
PSMC3-211ENST00000531653 A6NCN8 305 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 BUB1BO60566 1050 aaPredicted RBP11.18□□□□□ -0.62
PSMC3-211ENST00000531653 KATNA1O75449 491 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 SMC2O95347 1197 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 PIGNO95427 931 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 C9P02748 559 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 IVLP07476 585 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
PSMC3-211ENST00000531653 GNA15P30679 374 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 ADCY8P40145 1251 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 DEUP1Q05D60 604 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 CHAF1BQ13112 559 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 SLC25A52Q3SY17 297 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 PTPN20Q4JDL3 420 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 SNAP47Q5SQN1 464 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 LEKR1Q6ZMV7 388 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 CT55Q8WUE5 264 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 SMARCE1Q969G3 411 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 ECHDC3Q96DC8 303 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 CCDC34Q96HJ3 373 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 ZNF641Q96N77 438 aaPredicted RBP11.18□□□□□ -0.62
PSMC3-211ENST00000531653 GSDMAQ96QA5 445 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 TBCBQ99426 244 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 ACTL8Q9H568 366 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 NOL6Q9H6R4 1146 aaKnown RBP11.18□□□□□ -0.62
PSMC3-211ENST00000531653 RMND1Q9NWS8 449 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 ARMCX3Q9UH62 379 aaPredicted RBP11.18□□□□□ -0.62
PSMC3-211ENST00000531653 SUFUQ9UMX1 484 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
PSMC3-211ENST00000531653 KIAA0754O94854 1291 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 FGF5P12034 268 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 RHOQP17081 205 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 XPAP23025 273 aaPredicted RBP11.17□□□□□ -0.62
PSMC3-211ENST00000531653 TEAD1P28347 426 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 PTGER4P35408 488 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 SULT1E1P49888 294 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 CCL11P51671 97 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 EPHA4P54764 986 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 FKBP3Q00688 224 aaKnown RBP11.17□□□□□ -0.62
PSMC3-211ENST00000531653 BIRC2Q13490 618 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 IL11RAQ14626 422 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 GRM3Q14832 879 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 COBLL1Q53SF7 1204 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 DPPA4Q7L190 304 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 RHOT1Q8IXI2 618 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 IQCKQ8N0W5 287 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 CBARPQ8N350 705 aaPredicted RBP11.17□□□□□ -0.62
PSMC3-211ENST00000531653 C1orf131Q8NDD1 294 aaKnown RBP11.17□□□□□ -0.62
PSMC3-211ENST00000531653 ADAMTS17Q8TE56 1095 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 STAMBPL1Q96FJ0 436 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 COQ10AQ96MF6 247 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 TIGD1Q96MW7 591 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 SLC38A3Q99624 504 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 SMAD5Q99717 465 aaKnown RBP11.17□□□□□ -0.62
PSMC3-211ENST00000531653 NUDT9Q9BW91 350 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 KLC2Q9H0B6 622 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 RUBCNLQ9H714 662 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 LHX9Q9NQ69 397 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.17□□□□□ -0.626e-6■■□□□ 12.6
PSMC3-211ENST00000531653 MOSPD1Q9UJG1 213 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 MAN1B1Q9UKM7 699 aa11.17□□□□□ -0.62
PSMC3-211ENST00000531653 PADI1Q9ULC6 663 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms