RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 IQCA1Q86XH1 822 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 ANKRD13BQ86YJ7 626 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 CADM3Q8N126 398 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 ZBTB8BQ8NAP8 495 aaPredicted RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 OR6J1Q8NGC5 347 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 WIPF2Q8TF74 440 aaPredicted RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 PIGKQ92643 395 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 FCRL5Q96RD9 977 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 PAFAH2Q99487 392 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 KIFC3Q9BVG8 833 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 TM2D2Q9BX73 214 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 C1QTNF1Q9BXJ1 281 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 IFIH1Q9BYX4 1025 aaKnown RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 HIPK2Q9H2X6 1198 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 HRH4Q9H3N8 390 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 PSD3Q9NYI0 1048 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 PROCRQ9UNN8 238 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 TCRBV21S2A2A0A5A6 115 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 URADA6NGE7 173 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 LRRC72A6NJI9 287 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 B4DGG1 531 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 AVILO75366 819 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 TGDSO95455 350 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 LCKP06239 509 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 TPOP07202 933 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 CCDC175P0C221 793 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 PCNAP12004 261 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ST6GAL1P15907 406 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 CPT2P23786 658 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ATP5DP30049 168 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 CIITAP33076 1130 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ME1P48163 572 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 CLCN3P51790 818 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 TFAP4Q01664 338 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 DDR1Q08345 913 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ACSM2AQ08AH3 577 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 GRIK3Q13003 919 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 GRAPQ13588 217 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ALCAMQ13740 583 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 SNTB1Q13884 538 aaKnown RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 ASIC2Q16515 512 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 KRT24Q2M2I5 525 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 SYTL3Q4VX76 610 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 IGSF11Q5DX21 431 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ACSM2BQ68CK6 577 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 CREBRFQ8IUR6 639 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 RNF168Q8IYW5 571 aaPredicted RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 ZCCHC9Q8N567 271 aaKnown RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 ARFGAP1Q8N6T3 406 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ARL14EPQ8N8R7 260 aaPredicted RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 HJURPQ8NCD3 748 aaPredicted RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 KAT2AQ92830 837 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 DGAT2Q96PD7 388 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 RAB3IPQ96QF0 476 aaPredicted RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 SIN3AQ96ST3 1273 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 SEPT5Q99719 369 aaPredicted RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 CCDC106Q9BWC9 280 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 C1QTNF5Q9BXJ0 243 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 MRPL9Q9BYD2 267 aaKnown RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 FAM234AQ9H0X4 552 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ACTR5Q9H9F9 607 aaPredicted RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 ZNF304Q9HCX3 659 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 MLXIPLQ9NP71 852 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ANAPC5Q9UJX4 755 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 SLC8A2Q9UPR5 921 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 EXO1Q9UQ84 846 aaKnown RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 CMAHPQ9Y471 501 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 SNX5Q9Y5X3 404 aa4.5□□□□□ -1.69
USP47-211ENST00000531513 ZFP37Q9Y6Q3 630 aaPredicted RBP4.5□□□□□ -1.69
USP47-211ENST00000531513 A0A1B0GVM2 712 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 TRBC2A0A5B9 178 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 TYW5A2RUC4 315 aaKnown RBP4.49□□□□□ -1.69
USP47-211ENST00000531513 KLRF2D3W0D1 207 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 RNMTO43148 476 aaKnown RBP4.49□□□□□ -1.69
USP47-211ENST00000531513 SLC7A4O43246 635 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 NEURL1O76050 574 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 TMCC1O94876 653 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 BAG2O95816 211 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 ATP5BP06576 529 aaKnown RBP4.49□□□□□ -1.69
USP47-211ENST00000531513 TACR3P29371 465 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 HOXA7P31268 230 aaPredicted RBP4.49□□□□□ -1.69
USP47-211ENST00000531513 SHMT1P34896 483 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 GP5P40197 560 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 CLCNKBP51801 687 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 CAMK2DQ13557 499 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 USP41Q3LFD5 358 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 LRRC8EQ6NSJ5 796 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 C11orf88Q6PI97 169 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 COLCA1Q6ZS62 124 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 SEPT14Q6ZU15 432 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 UBE2Q1Q7Z7E8 422 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 GLRX5Q86SX6 157 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 PIM3Q86V86 326 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 IGFN1Q86VF2 1251 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 CCDC25Q86WR0 208 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 TMC8Q8IU68 726 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 LURAP1LQ8IV03 231 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 HACE1Q8IYU2 909 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 FAM185AQ8N0U4 392 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms