RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 GPBAR1Q8TDU6 330 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 FNIP1Q8TF40 1166 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 PATE1Q8WXA2 126 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 NUDCD1Q96RS6 583 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 SYT11Q9BT88 431 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 HAUS4Q9H6D7 363 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 NOD2Q9HC29 1040 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 KCTD5Q9NXV2 234 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 CD84Q9UIB8 345 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 TTLL3Q9Y4R7 772 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 KIF26BQ2KJY2 2108 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 C9orf172C9J069 976 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 STMND1H3BQB6 276 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 HTRA2O43464 458 aaPredicted RBP15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 WISP1O95388 367 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 CEACAM5P06731 702 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 CCL4P13236 92 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 CTPS1P17812 591 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 LHCGRP22888 699 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 ANP32AP39687 249 aaKnown RBP15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 MMP13P45452 471 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 GPR1P46091 355 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 HCAR3P49019 387 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 CYP4F2P78329 520 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 NFKB2Q00653 900 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 B4GALNT1Q00973 533 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 LINC00303Q3SY05 128 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 TDRD12Q587J7 1177 aaKnown RBP15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 ARMC12Q5T9G4 340 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 MARK2Q7KZI7 788 aaKnown RBP15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 TSPAN33Q86UF1 283 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 NRROSQ86YC3 692 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 NSMCE3Q96MG7 304 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 OR2M4Q96R27 311 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 MGME1Q9BQP7 344 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 TEX101Q9BY14 249 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 FRMD8Q9BZ67 464 aaPredicted RBP15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 NAT10Q9H0A0 1025 aaKnown RBP15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 MRPL47Q9HD33 250 aaKnown RBP15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 COL6A6A6NMZ7 2263 aa15.79■□□□□ 0.12
CHMP4A-204ENST00000530996 HGSO14964 777 aaPredicted RBP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 FGF1P05230 155 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 MYBL1P10243 752 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 AMPD1P23109 780 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 CSTF2P33240 577 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 SSR1P43307 286 aaKnown RBP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 POLD2P49005 469 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 EPHB1P54762 984 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 CTBSQ01459 385 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 ITKQ08881 620 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 KRT81Q14533 505 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 NCAPHQ15003 741 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 DPYSL2Q16555 572 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 FILIP1LQ4L180 1135 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 CCDC183Q5T5S1 534 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 NKAIN2Q5VXU1 208 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 Q6ZVL8 140 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 APTXQ7Z2E3 356 aaKnown RBP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 ZNF571Q7Z3V5 609 aaPredicted RBP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 ZNF438Q7Z4V0 828 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 TRIM74Q86UV6 250 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 FAM129CQ86XR2 697 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 PGBD5Q8N414 524 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 PTCD2Q8WV60 388 aaKnown RBP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 COL26A1Q96A83 441 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 AHCYL2Q96HN2 611 aaKnown RBP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 CSPG4P5Q96PW8 444 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 NT5MQ9NPB1 228 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 ETNK2Q9NVF9 386 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 TRNAU1APQ9NX07 287 aaKnown RBP15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 KCNK4Q9NYG8 393 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 PHTF1Q9UMS5 762 aa15.78■□□□□ 0.12
CHMP4A-204ENST00000530996 LRRK1Q38SD2 2015 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 IGHV5-10-1A0A0J9YXX1 117 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 LRRC10BA6NIK2 292 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 PSMD11O00231 422 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 B4GAT1O43505 415 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 PGLSO95336 258 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 MPSTP25325 297 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 IL1R2P27930 398 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 PCK1P35558 622 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 GJC1P36383 396 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 ADCY8P40145 1251 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 CDH6P55285 790 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 TYRO3Q06418 890 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 MARC1Q5VT66 337 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 E4F1Q66K89 784 aaPredicted RBP15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 GALNT13Q8IUC8 556 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 NDUFAF2Q8N183 169 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 IL22RA1Q8N6P7 574 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 ART4Q93070 314 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 AP2M1Q96CW1 435 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 HSD3B7Q9H2F3 369 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 TMEM98Q9Y2Y6 226 aa15.77■□□□□ 0.12
CHMP4A-204ENST00000530996 A0A0U1RQS6 177 aa15.76■□□□□ 0.11
CHMP4A-204ENST00000530996 DDX3XO00571 662 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHMP4A-204ENST00000530996 MAFKO60675 156 aa15.76■□□□□ 0.11
CHMP4A-204ENST00000530996 PPFIA2O75334 1257 aa15.76■□□□□ 0.11
CHMP4A-204ENST00000530996 IVLP07476 585 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms