RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CCDC162PA2VCL2 907 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 CXorf49A8MYA2 514 aaPredicted RBP10.64□□□□□ -0.71
SOX6-213ENST00000530378 DYNC1I1O14576 645 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 AREL1O15033 823 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A9O60656 530 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 ATG13O75143 517 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 C6P13671 934 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 BPIP17213 487 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 ARNTP27540 789 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 MAT2AP31153 395 aaKnown RBP10.64□□□□□ -0.71
SOX6-213ENST00000530378 SLCO1A2P46721 670 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 TPMTP51580 245 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 PRAMEP78395 509 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 PTSQ03393 145 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 CASP8Q14790 479 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 HSP90AA5PQ58FG0 334 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 SPANXN3Q5MJ09 141 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 STEAP4Q687X5 459 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 SEL1L3Q68CR1 1132 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 KCNMB4Q86W47 210 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 CTAGE3PQ8IX95 158 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 NAT14Q8WUY8 206 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 HNRNPLLQ8WVV9 542 aaKnown RBP10.64□□□□□ -0.71
SOX6-213ENST00000530378 CERS2Q96G23 380 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 AGAP2Q99490 1192 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 MYOCQ99972 504 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 FBRSQ9HAH7 460 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A7Q9HAW7 530 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A10Q9HAW8 530 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A8Q9HAW9 530 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 IARS2Q9NSE4 1012 aaKnown RBP10.64□□□□□ -0.71
SOX6-213ENST00000530378 SPATA6Q9NWH7 488 aaPredicted RBP10.64□□□□□ -0.71
SOX6-213ENST00000530378 HACD3Q9P035 362 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 EBF1Q9UH73 591 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 PKP3Q9Y446 797 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 FADS3Q9Y5Q0 445 aa10.64□□□□□ -0.71
SOX6-213ENST00000530378 A0A1W2PQ67 120 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 POC1B-GALNT4F8VUJ3 575 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 RPP40O75818 363 aaKnown RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 FAM155BO75949 473 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 MC4RP32245 332 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 ACSL1P33121 698 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 HMGCLP35914 325 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 CDKN1CP49918 316 aaPredicted RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 STC1P52823 247 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 ADPRHP54922 357 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 PPP2CBP62714 309 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 PPP2CAP67775 309 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 DMWDQ09019 674 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 ELP6Q0PNE2 266 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 LONRF1Q17RB8 773 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 KBTBD12Q3ZCT8 623 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 LIPIQ6XZB0 460 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 Q6ZVL8 140 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 TMEM135Q86UB9 458 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 RELL1Q8IUW5 271 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 SPEM1Q8N4L4 309 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 MREGQ8N565 214 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 PPM1NQ8N819 430 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 GPR26Q8NDV2 337 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 HCAR2Q8TDS4 363 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 EPS8L3Q8TE67 593 aaKnown RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 CXorf40AQ8TE69 158 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 SCAMP4Q969E2 229 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 ATXN7L3BQ96GX2 97 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 LYSMD1Q96S90 227 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 TRABDQ9H4I3 376 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 MRM3Q9HC36 420 aaKnown RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 NLE1Q9NVX2 485 aaPredicted RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 IL17CQ9P0M4 197 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 MARCH4Q9P2E8 410 aaPredicted RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 PPIL1Q9Y3C6 166 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 HCN4Q9Y3Q4 1203 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 VPS13AQ96RL7 3174 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 ABCA7Q8IZY2 2146 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 A0A087WUV0 522 aaPredicted RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 EXOC1LA0A1B0GW35 172 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 MAGEB16A2A368 324 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 FAM86C2PA6NEL3 165 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 IGLON5A6NGN9 336 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 LZTS3O60299 673 aaPredicted RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 SASH3O75995 380 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 PRAMEF1O95521 474 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 GOT2P00505 430 aaKnown RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 GM2AP17900 193 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 CA5AP35218 305 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 PHBP35232 272 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 RPS9P46781 194 aaKnown RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 MPP1Q00013 466 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 IFFO1Q0D2I5 559 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 SEMA3AQ14563 771 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 SKIDA1Q1XH10 827 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 ZRANB3Q5FWF4 1079 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 ZNF470Q6ECI4 717 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 KIAA0930Q6ICG6 404 aaPredicted RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 DENND6AQ8IWF6 608 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 PELI3Q8N2H9 469 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 STYXQ8WUJ0 223 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 PTCD2Q8WV60 388 aaKnown RBP10.63□□□□□ -0.71
SOX6-213ENST00000530378 CDKN2AIPNLQ96HQ2 116 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms