RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 LRRN4Q8WUT4 740 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 EXOC2Q96KP1 924 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 PRDM12Q9H4Q4 367 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 CLK4Q9HAZ1 481 aaKnown RBP12.95□□□□□ -0.34
MACF1-230ENST00000530275 EXD2Q9NVH0 621 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 PCDHGB3Q9Y5G1 929 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 CLDN5O00501 218 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 ITGA3P26006 1051 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 DPYSQ14117 519 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 SUZ12Q15022 739 aaKnown RBP12.95□□□□□ -0.34
MACF1-230ENST00000530275 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 CPTPQ5TA50 214 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 YTHDF3Q7Z739 585 aaKnown RBP12.95□□□□□ -0.34
MACF1-230ENST00000530275 MCMBPQ9BTE3 642 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 NEDD8-MDP1E9PL57 170 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 EPHA3P29320 983 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 CDC25CP30307 473 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 C5orf22Q49AR2 442 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 BEND5Q7L4P6 421 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 FAM124AQ86V42 546 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 PIK3C3Q8NEB9 887 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 COPS8Q99627 209 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 TBC1D10AQ9BXI6 508 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 GRM5P41594 1212 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 FKBP1CQ5VVH2 108 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 CAPN13Q6MZZ7 669 aaPredicted RBP12.95□□□□□ -0.34
MACF1-230ENST00000530275 ESRP1Q6NXG1 681 aaKnown RBP12.95□□□□□ -0.34
MACF1-230ENST00000530275 CUZD1Q86UP6 607 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 STX12Q86Y82 276 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 TNS4Q8IZW8 715 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 HDAC10Q969S8 669 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 FCRL4Q96PJ5 515 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 ACP6Q9NPH0 428 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 CKLFQ9UBR5 152 aa12.95□□□□□ -0.34
MACF1-230ENST00000530275 RIPK1Q13546 671 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 PIK3R6Q5UE93 754 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 KLHL35Q6PF15 583 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 FAM131AQ6UXB0 335 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 FAM35AQ86V20 835 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 PHYKPLQ8IUZ5 450 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 PARP8Q8N3A8 854 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 IPCEF1Q8WWN9 437 aaPredicted RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 MRPL45Q9BRJ2 306 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 TDRD1Q9BXT4 1180 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 PGRMC2O15173 223 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 PSIP1O75475 530 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 LYNP07948 512 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 NOMO3P69849 1222 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 TAF8Q7Z7C8 310 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 CLP1Q92989 425 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 WDR18Q9BV38 432 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 EFR3BQ9Y2G0 817 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 ABCA9Q8IUA7 1624 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 SRRM3A6NNA2 597 aaPredicted RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 TRBC1P01850 177 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 CLUP10909 449 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 CD52P31358 61 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 RPS6KA3P51812 740 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 SMAD3P84022 425 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 AAGABQ6PD74 315 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 BBS12Q6ZW61 710 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 AMIGO2Q86SJ2 522 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 CPA6Q8N4T0 437 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 VANGL1Q8TAA9 524 aaPredicted RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 PPP1R13LQ8WUF5 828 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 TIFAQ96CG3 184 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 TRNT1Q96Q11 434 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 ZNF490Q9ULM2 529 aaPredicted RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 DERAQ9Y315 318 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 FADS2O95864 444 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 ITPKBP27987 946 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 RPL5P46777 297 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 CCL23P55773 120 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 ALKBH2Q6NS38 261 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 GPR142Q7Z601 462 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 VSIG10LQ86VR7 867 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 MREGQ8N565 214 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 ZBTB2Q8N680 514 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 AP2M1Q96CW1 435 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 HOPXQ9BPY8 73 aaPredicted RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 ACSS3Q9H6R3 686 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 IMP3Q9NV31 184 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 COMMD3-BMI1R4GMX3 469 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 A0A1W2PRG6 482 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 FAM86C2PA6NEL3 165 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 CASKO14936 926 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 CHST10O43529 356 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 RPP40O75818 363 aaKnown RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 PGM3O95394 542 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 C9P02748 559 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 PPP1R26Q5T8A7 1209 aaPredicted RBP12.94□□□□□ -0.34
MACF1-230ENST00000530275 ATCAYQ86WG3 371 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 C12orf56Q8IXR9 622 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 HAVCR1Q96D42 359 aa12.94□□□□□ -0.34
MACF1-230ENST00000530275 NPAS2Q99743 824 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms