RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CCR10P46092 362 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 TMPRSS3P57727 454 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 CFHR1Q03591 330 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 ZNF268Q14587 947 aaPredicted RBP6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 CAVIN1Q6NZI2 390 aaKnown RBP6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 PET117Q6UWS5 81 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 PQLC2Q6ZP29 291 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 TRILQ7L0X0 811 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 GDAP1Q8TB36 358 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 LARP4BQ92615 738 aaKnown RBP6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 EME1Q96AY2 570 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 OTULINQ96BN8 352 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 EGLN2Q96KS0 407 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 NUDCD1Q96RS6 583 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 PCGF1Q9BSM1 259 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 SYT17Q9BSW7 474 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 THUMPD3Q9BV44 507 aaKnown RBP6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 MRPL9Q9BYD2 267 aaKnown RBP6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 FAM129AQ9BZQ8 928 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 B3GNT4Q9C0J1 378 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 RETREG1Q9H6L5 497 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 WBP11Q9Y2W2 641 aaKnown RBP6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 NFE2L3Q9Y4A8 694 aa6.49□□□□□ -1.37
CAPRIN1-208ENST00000530008 TMEM191CA6NGB0 347 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 VCYO14598 125 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 PRPF4O43172 522 aaKnown RBP eCLIP6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 FTCDO95954 541 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 C6P13671 934 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 ENO3P13929 434 aaPredicted RBP6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 MMP14P50281 582 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 GRSF1Q12849 480 aaKnown RBP eCLIP6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 SPATS1Q496A3 300 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 SLC9C1Q4G0N8 1177 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 C11orf88Q6PI97 169 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 ZNF627Q7L945 461 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 UBE2Q1Q7Z7E8 422 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 FAM217AQ8IXS0 508 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 RBFAQ8N0V3 343 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 PI4KAP1Q8N8J0 262 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 KDM1BQ8NB78 822 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 MSANTD4Q8NCY6 345 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 CEP76Q8TAP6 659 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 TEKT4Q8WW24 435 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 FAM162AQ96A26 154 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 LINC00615Q96LM1 132 aaPredicted RBP6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 SPAG5Q96R06 1193 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 AGAP2Q99490 1192 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 SH2D3AQ9BRG2 576 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 RTN4RQ9BZR6 473 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 GPR88Q9GZN0 384 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 NPFFR1Q9GZQ6 430 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 MMP27Q9H306 513 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 CYSLTR2Q9NS75 346 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 CISD1Q9NZ45 108 aaKnown RBP6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 ARPP21Q9UBL0 812 aaPredicted RBP6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 DNAJB4Q9UDY4 337 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 PACSIN3Q9UKS6 424 aa6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 AGO2Q9UKV8 859 aaKnown RBP6.48□□□□□ -1.37
CAPRIN1-208ENST00000530008 MAGEB17A8MXT2 336 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 NPIPB8E9PQR5 432 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 PSMA7O14818 248 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 WDR46O15213 610 aaKnown RBP6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 SLCO2B1O94956 709 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 CBSLP0DN79 551 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 TGFB3P10600 412 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 ERCC2P18074 760 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 CHATP28329 748 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 HOXC8P31273 242 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 CBSP35520 551 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 KRT2P35908 639 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 MATR3P43243 847 aaKnown RBP eCLIP6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 NPY4RP50391 375 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 RAB28P51157 221 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 ARSEP51690 589 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 POLGP54098 1239 aaPredicted RBP6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 RALGDSQ12967 914 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 TNIP1Q15025 636 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 HYAL4Q2M3T9 481 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 TMEM119Q4V9L6 283 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 TMEM71Q6P5X7 295 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 CREBRFQ8IUR6 639 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 SFTPA2Q8IWL1 248 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 CHCHD4Q8N4Q1 142 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 TSPAN14Q8NG11 270 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 SETD6Q8TBK2 473 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 IGFBPL1Q8WX77 278 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 TMEM18Q96B42 140 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 HDAC11Q96DB2 347 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 SLC25A23Q9BV35 468 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 NUP85Q9BW27 656 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 PIGMQ9H3S5 423 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 GPR108Q9NPR9 543 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 HINT3Q9NQE9 182 aaKnown RBP6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 TMEM45AQ9NWC5 275 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 HAO2Q9NYQ3 351 aa6.47□□□□□ -1.37
CAPRIN1-208ENST00000530008 BICDL2A1A5D9 508 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 TRIM64A6NGJ6 449 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 TRIM64BA6NI03 449 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 SMTNL1A8MU46 457 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 SPRY1O43609 319 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms