RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 LRRC8EQ6NSJ5 796 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 TMCO3Q6UWJ1 677 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 PRPF39Q86UA1 669 aaKnown RBP4.69□□□□□ -1.66
C11orf88-204ENST00000529661 PALB2Q86YC2 1186 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 BICD2Q8TD16 824 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 ARHGEF26Q96DR7 871 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 MED30Q96HR3 178 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 OR2A14Q96R47 310 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 SIN3AQ96ST3 1273 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 NCAPGQ9BPX3 1015 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 SLF1Q9BQI6 1058 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 C1QTNF5Q9BXJ0 243 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 MAK16Q9BXY0 300 aaKnown RBP4.69□□□□□ -1.66
C11orf88-204ENST00000529661 RANGRFQ9HD47 186 aaPredicted RBP4.69□□□□□ -1.66
C11orf88-204ENST00000529661 FBXL17Q9UF56 701 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 LRP12Q9Y561 859 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 ATP2C2O75185 946 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 ENTPD3O75355 529 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 NDUFS3O75489 264 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 SLC25A12O75746 678 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 CLDN7O95471 211 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 HOXC6P09630 235 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 TGFB3P10600 412 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 KRT10P13645 584 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 ZNF182P17025 639 aaPredicted RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 HOXD3P31249 432 aaPredicted RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 DCTDP32321 178 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 EIF2DP41214 584 aaKnown RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 CDH12P55289 794 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 EGR4Q05215 589 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 LTBQ06643 244 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 CRYZQ08257 329 aaKnown RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 ADIPOQQ15848 244 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 USP41Q3LFD5 358 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 FSCBQ5H9T9 825 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 C6orf141Q5SZD1 244 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 KIAA0930Q6ICG6 404 aaPredicted RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 PLEKHA7Q6IQ23 1121 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 ZNF280DQ6N043 979 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 CES5AQ6NT32 575 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 FBXO46Q6PJ61 603 aaPredicted RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 ZNF367Q7RTV3 350 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 SPATA2LQ8IUW3 424 aaPredicted RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 WDR63Q8IWG1 891 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 SCML4Q8N228 414 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 TMEM163Q8TC26 289 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 SLC35F5Q8WV83 523 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 FBXL8Q96CD0 374 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 ZC3HAV1LQ96H79 300 aaKnown RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 CCDC34Q96HJ3 373 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 SLC41A2Q96JW4 573 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 SEPT5Q99719 369 aaPredicted RBP4.68□□□□□ -1.66
C11orf88-204ENST00000529661 FAM110AQ9BQ89 295 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 MSTO1Q9BUK6 570 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 SEZ6LQ9BYH1 1024 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 LHPPQ9H008 270 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 BPIFA1Q9NP55 256 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 PDE7BQ9NP56 450 aa4.68□□□□□ -1.66
C11orf88-204ENST00000529661 C4orf47A7E2U8 309 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 VWA5AO00534 786 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 SH2B2O14492 632 aaPredicted RBP4.67□□□□□ -1.66
C11orf88-204ENST00000529661 NKX2-2O95096 273 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 DNTTP04053 509 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 RB1P06400 928 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 MMP2P08253 660 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 RRM1P23921 792 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 NNMTP40261 264 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 SNX16P57768 344 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 PSMC6P62333 389 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 ABATP80404 500 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 ITGADQ13349 1161 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 ARHGEF6Q15052 776 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 ASTE1Q2TB18 679 aaPredicted RBP4.67□□□□□ -1.66
C11orf88-204ENST00000529661 LINGO2Q7L985 606 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 HAPLN4Q86UW8 402 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 ADHFE1Q8IWW8 467 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 RNF168Q8IYW5 571 aaPredicted RBP4.67□□□□□ -1.66
C11orf88-204ENST00000529661 POC5Q8NA72 575 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 MIGA1Q8NAN2 632 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 BEST2Q8NFU1 509 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 HUS1BQ8NHY5 278 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 ELP5Q8TE02 316 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 WASF1Q92558 559 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 ZKSCAN4Q969J2 545 aaPredicted RBP4.67□□□□□ -1.66
C11orf88-204ENST00000529661 JAKMIP2Q96AA8 810 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 TMEM18Q96B42 140 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 PPP1R13BQ96KQ4 1090 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 GFM1Q96RP9 751 aaKnown RBP4.67□□□□□ -1.66
C11orf88-204ENST00000529661 TEX12Q9BXU0 123 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 NPFFR1Q9GZQ6 430 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 MORF4L1Q9UBU8 362 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 WNT16Q9UBV4 365 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 NENFQ9UMX5 172 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 PROCRQ9UNN8 238 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 RAI2Q9Y5P3 530 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 CNTNAP2Q9UHC6 1331 aa4.67□□□□□ -1.66
C11orf88-204ENST00000529661 SYNDIG1LA6NDD5 238 aa4.66□□□□□ -1.66
C11orf88-204ENST00000529661 CHL1O00533 1208 aa4.66□□□□□ -1.66
C11orf88-204ENST00000529661 LDB2O43679 373 aa4.66□□□□□ -1.66
C11orf88-204ENST00000529661 MTA2O94776 668 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms