RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ITGB7P26010 798 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 RECQLP46063 649 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 RXRGP48443 463 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 DNA2P51530 1060 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 ZNF135P52742 658 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 C21orf59P57076 290 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 CYP4F2P78329 520 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 DMTNQ08495 405 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 DPYSQ14117 519 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 NAA30Q147X3 362 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 TGIF1Q15583 401 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 SMTNL2Q2TAL5 461 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 MYLK3Q32MK0 819 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 PPP6R3Q5H9R7 873 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 ATXN7L2Q5T6C5 722 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 NEK5Q6P3R8 708 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 H2AFVQ71UI9 128 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 TIPARPQ7Z3E1 657 aaKnown RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 POLNQ7Z5Q5 900 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 ADAT2Q7Z6V5 191 aaKnown RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 TRIM69Q86WT6 500 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 CPNE8Q86YQ8 564 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 TP53INP2Q8IXH6 220 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 ARL14Q8N4G2 192 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 NPWQ8N729 165 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 OR6K2Q8NGY2 324 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 FAM71BQ8TC56 605 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 CASKIN2Q8WXE0 1202 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 CELF6Q96J87 481 aaKnown RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 RBSNQ9H1K0 784 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 ZWILCHQ9H900 591 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 NHEJ1Q9H9Q4 299 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 PREBQ9HCU5 417 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 ETNK2Q9NVF9 386 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 TPX2Q9ULW0 747 aaKnown RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 MFHAS1Q9Y4C4 1052 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 ENTPD2Q9Y5L3 495 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 AKR1B15C9JRZ8 316 aaPredicted RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 MYO1FO00160 1098 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 INSIG1O15503 277 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 DAPK3O43293 454 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 AKR1B10O60218 316 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 PRAMEF11O60813 436 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 RNGTTO60942 597 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 POP4O95707 220 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 GP1BAP07359 652 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ADRB3P13945 408 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 CD38P28907 300 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 MAT2AP31153 395 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ARRB1P49407 418 aaPredicted RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 PAPOLAP51003 745 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ARSEP51690 589 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 NEK3P51956 506 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 SNRPD1P62314 119 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 BNIP3Q12983 259 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ATP13A4Q4VNC1 1196 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 NAPEPLDQ6IQ20 393 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 BORAQ6PGQ7 559 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ARHGAP36Q6ZRI8 547 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 PARS2Q7L3T8 475 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 PRPF39Q86UA1 669 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ZNF354CQ86Y25 554 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 TC2NQ8N9U0 490 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 TEKT4Q8WW24 435 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 HSPH1Q92598 858 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ATXN7L3BQ96GX2 97 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 PPP1R16AQ96I34 528 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 SERAC1Q96JX3 654 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 CSPG4P5Q96PW8 444 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 TRIM5Q9C035 493 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ZDHHC6Q9H6R6 413 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 PCDH18Q9HCL0 1135 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 DYRK4Q9NR20 520 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ZNHIT6Q9NWK9 470 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 CTTNBP2NLQ9P2B4 639 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 UVRAGQ9P2Y5 699 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 LHX3Q9UBR4 397 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 ZFR2Q9UPR6 939 aaKnown RBP8.53□□□□□ -1.04
SSBP3-212ENST00000528930 PCDHGA7Q9Y5G6 932 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 FADS3Q9Y5Q0 445 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 CROCCQ5TZA2 2017 aa8.53□□□□□ -1.04
SSBP3-212ENST00000528930 A0A1W2PQU0 124 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 ARHGAP42A6NI28 874 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 C16orf96A6NNT2 1141 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-212ENST00000528930 H3BRJ5 948 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 KRIT1O00522 736 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 TRIM38O00635 465 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 SIGLEC6O43699 453 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 AP1G1O43747 822 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 VPS4BO75351 444 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 PROSCO94903 275 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 TNFSF15O95150 251 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 PEX11BO96011 259 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 LDLRP01130 860 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 IL2RAP01589 272 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 UGT2B4P06133 528 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 C8BP07358 591 aa8.52□□□□□ -1.05
SSBP3-212ENST00000528930 CD48P09326 243 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms