RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 MXRA8Q9BRK3 442 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 ZPBPQ9BS86 351 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 CCDC68Q9H2F9 335 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 JMJD4Q9H9V9 463 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 CYSLTR2Q9NS75 346 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 FAM96BQ9Y3D0 163 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 A3GALT2U3KPV4 340 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 ZMYM4Q5VZL5 1548 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 TRAPPC8Q9Y2L5 1435 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 KDM5CP41229 1560 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 RICTORQ6R327 1708 aa5.96□□□□□ -1.45
PCF11-202ENST00000528336 MLH3Q9UHC1 1453 aa5.96□□□□□ -1.45
PCF11-202ENST00000528336 A0A1B0GVM2 712 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 FAM90A8PA6NJQ4 464 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 P4HA2O15460 535 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 SMAD6O43541 496 aaKnown RBP5.96□□□□□ -1.46
PCF11-202ENST00000528336 SOX30O94993 753 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 FAM90A13PP0C7W8 464 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 FAM90A24PP0C7X0 464 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 MUTP22033 750 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 PIGAP37287 484 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 CTCFP49711 727 aaPredicted RBP5.96□□□□□ -1.46
PCF11-202ENST00000528336 THBS3P49746 956 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 DRG2P55039 364 aaKnown RBP5.96□□□□□ -1.46
PCF11-202ENST00000528336 CASP6P55212 293 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 PTP4A2Q12974 167 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 FJX1Q86VR8 437 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 DHX40Q8IX18 779 aaKnown RBP5.96□□□□□ -1.46
PCF11-202ENST00000528336 ARRDC2Q8TBH0 407 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 TRIB2Q92519 343 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 NEUROG1Q92886 237 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 OTULINQ96BN8 352 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 KLHL29Q96CT2 875 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 ZNF479Q96JC4 524 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 LYZL4Q96KX0 146 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 ADPGKQ9BRR6 497 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 USP44Q9H0E7 712 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 ABCG4Q9H172 646 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 HIPK2Q9H2X6 1198 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 PCDHB16Q9NRJ7 776 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 OLA1Q9NTK5 396 aaKnown RBP5.96□□□□□ -1.46
PCF11-202ENST00000528336 OR6C3Q9NZP0 311 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 MPP6Q9NZW5 540 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 XPO7Q9UIA9 1087 aaKnown RBP5.96□□□□□ -1.46
PCF11-202ENST00000528336 ARHGEF5Q12774 1597 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 SPAG9O60271 1321 aaKnown RBP5.96□□□□□ -1.46
PCF11-202ENST00000528336 CCDC141Q6ZP82 1450 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 PTPN23Q9H3S7 1636 aa5.96□□□□□ -1.46
PCF11-202ENST00000528336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.95□□□□□ -1.46
PCF11-202ENST00000528336 H7C0S8 307 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 SNAP23O00161 211 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 LDLRAD4O15165 306 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 BCAT2O15382 392 aaPredicted RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 USO1O60763 962 aaKnown RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 NGFRP08138 427 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 KIF5BP33176 963 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 AMTP48728 403 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 HARS2P49590 506 aaKnown RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 ADORA2A-AS1P86434 159 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 DSC1Q08554 894 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 GRIK3Q13003 919 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 HIST2H2ACQ16777 129 aaPredicted RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 TDRD12Q587J7 1177 aaKnown RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 R3HCC1LQ7Z5L2 792 aaKnown RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 NOXA1Q86UR1 476 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 SFTPA2Q8IWL1 248 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 ZCCHC9Q8N567 271 aaKnown RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 ANKRD52Q8NB46 1076 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 NFKBIDQ8NI38 313 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 SNX21Q969T3 373 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 THOC3Q96J01 351 aaKnown RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 TXNDC15Q96J42 360 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 RADILQ96JH8 1075 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 TMEM204Q9BSN7 226 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 RRBP1Q9P2E9 1410 aaKnown RBP5.95□□□□□ -1.46
PCF11-202ENST00000528336 PAM16Q9Y3D7 125 aa5.95□□□□□ -1.46
PCF11-202ENST00000528336 ZFYVE16Q7Z3T8 1539 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 ARHGEF40Q8TER5 1519 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 RTEL1-TNFRSF6BF6WH68 1400 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 ABCC5O15440 1437 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 IGHV4-28A0A0C4DH34 117 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 A0A0U1RQF3 1178 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 LACTBL1A8MY62 500 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 B4DLN1 442 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 J3KR12 359 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 CPLX1O14810 134 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 TIMM23O14925 209 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 KLK8O60259 260 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 PRSS2P07478 247 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 ABCD1P33897 745 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 RPL3P39023 403 aaKnown RBP5.94□□□□□ -1.46
PCF11-202ENST00000528336 GNAQP50148 359 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 ZNF132P52740 706 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 ST3GAL1Q11201 340 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 PPP2R5CQ13362 524 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 SCARB2Q14108 478 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 RNPS1Q15287 305 aaKnown RBP5.94□□□□□ -1.46
PCF11-202ENST00000528336 SHBQ15464 509 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 MFSD4BQ5TF39 518 aa5.94□□□□□ -1.46
PCF11-202ENST00000528336 ZNF517Q6ZMY9 492 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms