RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ACRBPQ8NEB7 543 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 KRT35Q92764 455 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 TADA1Q96BN2 335 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 TEKT5Q96M29 485 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 AGAP3Q96P47 875 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 VAT1Q99536 393 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 MLPHQ9BV36 600 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 CLPBQ9H078 707 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 GLOD4Q9HC38 313 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 SAE1Q9UBE0 346 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 U3KQA8 63 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 ASXL3Q9C0F0 2248 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 EME2A4GXA9 379 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 RGSL1A5PLK6 1076 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 TMEM202A6NGA9 273 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 APOC4-APOC2K7ER74 178 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 APOC2P02655 101 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 PECAM1P16284 738 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 PTPN3P26045 913 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 PTPN7P35236 360 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 CETN2P41208 172 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 STC1P52823 247 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 RWDD2BP57060 319 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 CDK3Q00526 305 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 ADCY2Q08462 1091 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 KIF5AQ12840 1032 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 PTPRRQ15256 657 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 NR0B2Q15466 257 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 CDKN3Q16667 212 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 QPCTQ16769 361 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 HES3Q5TGS1 186 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 RD3Q7Z3Z2 195 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 SYCE1Q8N0S2 351 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 PELI3Q8N2H9 469 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 PDCD7Q8N8D1 485 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 LRRC57Q8N9N7 239 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 SPC24Q8NBT2 197 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 UBE2Q2Q8WVN8 375 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 OR1E3Q8WZA6 343 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 AP2M1Q96CW1 435 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 SRPK1Q96SB4 655 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 LGR4Q9BXB1 951 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 ABCG8Q9H221 673 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 SEPT10Q9P0V9 454 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 DKK4Q9UBT3 224 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 DOLKQ9UPQ8 538 aa12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 MAP1BP46821 2468 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-209ENST00000528230 ARHGEF17Q96PE2 2063 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 GRID2IPA4D2P6 1211 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 TRABD2BA6NFA1 517 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 CLDN7O95471 211 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 GPR1P46091 355 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 GSDMDP57764 484 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 INSM1Q01101 510 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 CDK18Q07002 472 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 WASHC5Q12768 1159 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 LLGL1Q15334 1064 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 CDCP2Q5VXM1 449 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 RAET1GQ6H3X3 334 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 CCDC70Q6NSX1 233 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 ADAMTSL4Q6UY14 1074 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 HEATR4Q86WZ0 1026 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 DCBLD1Q8N8Z6 715 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 CCHCR1Q8TD31 782 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 NAT6Q93015 286 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 PDXPQ96GD0 296 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 SMIM14Q96QK8 99 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 CEP41Q9BYV8 373 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 FRMD8Q9BZ67 464 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 OSBPL8Q9BZF1 889 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 CCDC86Q9H6F5 360 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 MAGEE1Q9HCI5 957 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 FGF22Q9HCT0 170 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 AMFRQ9UKV5 643 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 ZMIZ1Q9ULJ6 1067 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 CLCA2Q9UQC9 943 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 RP1P56715 2156 aa12.08□□□□□ -0.48
TRAPPC4-209ENST00000528230 C1orf232A0A0U1RR37 186 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 PRSS38A1L453 326 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 FAM149AA5PLN7 773 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 MIF4GDA9UHW6 222 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 OPA1O60313 960 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 MT-CO3P00414 261 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 EPOP01588 193 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 CEACAM5P06731 702 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 MYF5P13349 255 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 SPINT3P49223 89 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 TARDBPQ13148 414 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 NOMO1Q15155 1222 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 OGFOD3Q6PK18 319 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 B4GALNT4Q76KP1 1039 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 PEX26Q7Z412 305 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 SLC35F3Q8IY50 421 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 ARL10Q8N8L6 244 aa12.07□□□□□ -0.48
TRAPPC4-209ENST00000528230 OR6C4Q8NGE1 309 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms