RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 C6orf203Q9P0P8 240 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 SAE1Q9UBE0 346 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 LCMT1Q9UIC8 334 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 NUDT5Q9UKK9 219 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 RAB21Q9UL25 225 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 MTUS1Q9ULD2 1270 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 GPR52Q9Y2T5 361 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 MFHAS1Q9Y4C4 1052 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 SNX10Q9Y5X0 201 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 SPAG17Q6Q759 2223 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 BPTFQ12830 3046 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 ZNF462Q96JM2 2506 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CKAP5Q14008 2032 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 PTPRZ1P23471 2315 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 MAP1BP46821 2468 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 TEP1Q99973 2627 aaKnown RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 SNRNP200O75643 2136 aaKnown RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 ZFHX2Q9C0A1 2572 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 ARHGEF17Q96PE2 2063 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 A0A087WV62 115 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 NOTOA8MTQ0 251 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 H0Y3Z8 333 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 I6L893 689 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 MDM4O15151 490 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 DAPK3O43293 454 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 MSI1O43347 362 aaKnown RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 CST8O60676 142 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PLXNA2O75051 1894 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PCDH8O95206 1070 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 GJB5O95377 273 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 SEC24AO95486 1093 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 URODP06132 367 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 HAPLN1P10915 354 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 NCAM1P13591 858 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 MYOGP15173 224 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PECAM1P16284 738 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 PRKCAP17252 672 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CAPN2P17655 700 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 DESP17661 470 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 ATF6P18850 670 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 MC4RP32245 332 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CHRNA3P32297 505 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PTPN7P35236 360 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CETN2P41208 172 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 MAGEA11P43364 429 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 TNNT3P45378 269 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 GLUD2P49448 558 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CARSP49589 748 aaKnown RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 VPS41P49754 854 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 ARSEP51690 589 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 YWHAGP61981 247 aaKnown RBP eCLIP4.25□□□□□ -1.73
CD44-226ENST00000527889 TUBB4BP68371 445 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 HTRA4P83105 476 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 DR1Q01658 176 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 OTUD4Q01804 1114 aaKnown RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 KRT17Q04695 432 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 DEUP1Q05D60 604 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 GPR17Q13304 367 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 TRIP13Q15645 432 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 TAZQ16635 292 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CYP1B1Q16678 543 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 GLE1Q53GS7 698 aaKnown RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 ERMARDQ5T6L9 678 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 BSPRYQ5W0U4 402 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PM20D1Q6GTS8 502 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 WDR93Q6P2C0 686 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 ZNF449Q6P9G9 518 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 VSTM1Q6UX27 236 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CCNI2Q6ZMN8 369 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 BBS12Q6ZW61 710 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 GAREM2Q75VX8 874 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 B4GALNT4Q76KP1 1039 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 ARCQ7LC44 396 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 STRADAQ7RTN6 431 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 BNIPLQ7Z465 357 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 MILR1Q7Z6M3 343 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 SCD5Q86SK9 330 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PRUNE1Q86TP1 453 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 RNF168Q8IYW5 571 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 VPS52Q8N1B4 723 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 NUP93Q8N1F7 819 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CCDC33Q8N5R6 958 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 NUP43Q8NFH3 380 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CMASQ8NFW8 434 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 OR2I1PQ8NGU4 316 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CCDC26Q8TAB7 109 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 SPPL2BQ8TCT7 592 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 DQX1Q8TE96 717 aaKnown RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 TEKT4Q8WW24 435 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 MAIP1Q8WWC4 291 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 ASB11Q8WXH4 323 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 IFT81Q8WYA0 676 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 IRGQQ8WZA9 623 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 FBXO32Q969P5 355 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 HRASLS5Q96KN8 279 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CCDC114Q96M63 670 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 GDAP1L1Q96MZ0 367 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 CLSTN3Q9BQT9 956 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 UBXN6Q9BZV1 441 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PITHD1Q9GZP4 211 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms