RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 USP45Q70EL2 814 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 GPBAR1Q8TDU6 330 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 CPLX3Q8WVH0 158 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 TEKT4Q8WW24 435 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 SPOCK2Q92563 424 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 TTC9Q92623 222 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 TMEM159Q96B96 161 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 DTD2Q96FN9 168 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 SCRN2Q96FV2 425 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 THAP2Q9H0W7 228 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 PCDH18Q9HCL0 1135 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 AKAP7Q9P0M2 348 aaPredicted RBP22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 ANAPC7Q9UJX3 599 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 NPIPB15A6NHN6 443 aaPredicted RBP22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 NVLO15381 856 aaKnown RBP22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 KALRNO60229 2985 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 PGLSO95336 258 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 FGF1P05230 155 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 ITIH1P19827 911 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 GPR1P46091 355 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 MAZP56270 477 aaKnown RBP22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 OR1D5P58170 312 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 TPM4P67936 248 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 CDK3Q00526 305 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 ZFP36L1Q07352 338 aaKnown RBP22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 PTPRRQ15256 657 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 TGIF1Q15583 401 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 DOK6Q6PKX4 331 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 SLC30A9Q6PML9 568 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 USP53Q70EK8 1073 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 NUP85Q9BW27 656 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 RDH14Q9HBH5 336 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 TRNAU1APQ9NX07 287 aaKnown RBP22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 SEPT10Q9P0V9 454 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 TAAR2Q9P1P5 351 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 SUFUQ9UMX1 484 aa22.35■■□□□ 1.17
TRAPPC4-208ENST00000527680 MYO1FO00160 1098 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 PSMD11O00231 422 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 B4GAT1O43505 415 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 FUCA1P04066 466 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 LHCGRP22888 699 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 AK4P27144 223 aaPredicted RBP22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 POLD2P49005 469 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 EPHB1P54762 984 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 B4GALNT1Q00973 533 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 PEX6Q13608 980 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 HADHQ16836 314 aaKnown RBP22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 FIGNQ5HY92 759 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 TSPAN33Q86UF1 283 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 NRROSQ86YC3 692 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 LRRC49Q8IUZ0 686 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 CBARPQ8N350 705 aaPredicted RBP22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 USP7Q93009 1102 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 SEMA3CQ99985 751 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 SEMA6CQ9H3T2 930 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 CD84Q9UIB8 345 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 PCDHB11Q9Y5F2 797 aa22.34■■□□□ 1.17
TRAPPC4-208ENST00000527680 ECEL1O95672 775 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 CPNE6O95741 557 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 SERPING1P05155 500 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 MMRN1Q13201 1228 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 IQCB1Q15051 598 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 TMEM164Q5U3C3 297 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 HGSNATQ68CP4 663 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 FRMD8Q9BZ67 464 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 SEMA4CQ9C0C4 833 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 TTLL3Q9Y4R7 772 aa22.33■■□□□ 1.17
TRAPPC4-208ENST00000527680 HELZ2Q9BYK8 2649 aaKnown RBP22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 PRAMEF33A0A0G2JMD5 474 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 A0A0U1RQS6 177 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 EFSO43281 561 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 PRAMEF10O60809 474 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 PDHA1P08559 390 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 LIPCP11150 499 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 GJC1P36383 396 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 PPM1FP49593 454 aaPredicted RBP22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 UBASH3AP57075 661 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 FANCCQ00597 558 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 CTBSQ01459 385 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 TMPRSS9Q7Z410 1059 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 NIPA2Q8N8Q9 360 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 PIH1D2Q8WWB5 315 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 SYN2Q92777 582 aaPredicted RBP22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 AP2M1Q96CW1 435 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 MED8Q96G25 268 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 TMEM98Q9Y2Y6 226 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 ATMQ13315 3056 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 AHCTF1Q8WYP5 2266 aa22.32■■□□□ 1.16
TRAPPC4-208ENST00000527680 A0A1W2PQJ5 194 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 ADCY8P40145 1251 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 ETV5P41161 510 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 SLC25A11Q02978 314 aaKnown RBP22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 MANEAQ5SRI9 462 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 LRRC66Q68CR7 880 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 RFLNAQ6ZTI6 216 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 TECPR1Q7Z6L1 1165 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 ZFAND4Q86XD8 727 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 SLITRK4Q8IW52 837 aa22.31■■□□□ 1.16
TRAPPC4-208ENST00000527680 KCTD6Q8NC69 237 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms