RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MRM3Q9HC36 420 aaKnown RBP18.81■□□□□ 0.6
SMPD1-203ENST00000527275 PRSS16Q9NQE7 514 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 ARHGEF3Q9NR81 526 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 GOLGA8TH3BQL2 631 aa18.8■□□□□ 0.6
SMPD1-203ENST00000527275 NPC1O15118 1278 aa18.8■□□□□ 0.6
SMPD1-203ENST00000527275 EDF1O60869 148 aaKnown RBP18.8■□□□□ 0.6
SMPD1-203ENST00000527275 SERPINB4P48594 390 aa18.8■□□□□ 0.6
SMPD1-203ENST00000527275 PTPRRQ15256 657 aa18.8■□□□□ 0.6
SMPD1-203ENST00000527275 ESRP1Q6NXG1 681 aaKnown RBP18.8■□□□□ 0.6
SMPD1-203ENST00000527275 GDPD4Q6W3E5 623 aa18.8■□□□□ 0.6
SMPD1-203ENST00000527275 CCDC121Q6ZUS5 278 aa18.8■□□□□ 0.6
SMPD1-203ENST00000527275 PIH1D2Q8WWB5 315 aa18.8■□□□□ 0.6
SMPD1-203ENST00000527275 ECHDC3Q96DC8 303 aa18.8■□□□□ 0.6
SMPD1-203ENST00000527275 MAN2B1O00754 1011 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 NEFHP12036 1026 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 EPHB1P54762 984 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 PDE1CQ14123 709 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-203ENST00000527275 POM121L1PQ3SYA9 428 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 ZNF852Q6ZMS4 543 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 ARMC2Q8NEN0 867 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 KCNV2Q8TDN2 545 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 KLHL32Q96NJ5 620 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 FAM129BQ96TA1 746 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 WNT16Q9UBV4 365 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 SUN2Q9UH99 717 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 SARDHQ9UL12 918 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 KRBA1A5PL33 1030 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 CCT8L1PA6NM43 557 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 TYK2P29597 1187 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 NTSR1P30989 418 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 LIMK2P53671 638 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 CORO7P57737 925 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 E2F5Q15329 346 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 DCLK2Q8N568 766 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 CCDC63Q8NA47 563 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 BLOC1S5Q8TDH9 187 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 OR8D1Q8WZ84 308 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 LRIG1Q96JA1 1093 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 CD320Q9NPF0 282 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 NSMCE4AQ9NXX6 385 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 FBXL21Q9UKT6 434 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 PPM1HQ9ULR3 514 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 ARL2BPQ9Y2Y0 163 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 BPTFQ12830 3046 aa18.79■□□□□ 0.6
SMPD1-203ENST00000527275 ADAM23O75077 832 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 VAPBO95292 243 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 F7P08709 466 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-203ENST00000527275 CSE1LP55060 971 aaKnown RBP18.78■□□□□ 0.6
SMPD1-203ENST00000527275 SEPT6Q14141 434 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 TXNDC5Q8NBS9 432 aaKnown RBP18.78■□□□□ 0.6
SMPD1-203ENST00000527275 ATXN7L3BQ96GX2 97 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 SLC2A6Q9UGQ3 507 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 DCDC2Q9UHG0 476 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 MYLKQ15746 1914 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 KLF8O95600 359 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-203ENST00000527275 CTPS1P17812 591 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 GRIA4P48058 902 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 ARCN1P48444 511 aaKnown RBP18.78■□□□□ 0.6
SMPD1-203ENST00000527275 RPL26P61254 145 aaKnown RBP18.78■□□□□ 0.6
SMPD1-203ENST00000527275 PRKCQQ04759 706 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 CNGA3Q16281 694 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 FBXO43Q4G163 708 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 OTOAQ7RTW8 1153 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 GJD3Q8N144 294 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 CCT6BQ92526 530 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 GABRG3Q99928 467 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 OSBPL1AQ9BXW6 950 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 TREX1Q9NSU2 369 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 RPL26L1Q9UNX3 145 aaKnown RBP18.78■□□□□ 0.6
SMPD1-203ENST00000527275 MTO1Q9Y2Z2 717 aaKnown RBP18.78■□□□□ 0.6
SMPD1-203ENST00000527275 SPO11Q9Y5K1 396 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 CKAP5Q14008 2032 aa18.78■□□□□ 0.6
SMPD1-203ENST00000527275 A0A0U1RQS6 177 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 HEATR9A2RTY3 570 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 KPNA3O00505 521 aaPredicted RBP18.77■□□□□ 0.6
SMPD1-203ENST00000527275 TOP3BO95985 862 aaKnown RBP18.77■□□□□ 0.6
SMPD1-203ENST00000527275 PRNPP04156 253 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 ALPIP09923 528 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 PAMP19021 973 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 BGNP21810 368 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 METAP1P53582 386 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 MRPS21P82921 87 aaKnown RBP18.77■□□□□ 0.6
SMPD1-203ENST00000527275 CAMK2GQ13555 558 aaPredicted RBP18.77■□□□□ 0.6
SMPD1-203ENST00000527275 PPM1JQ5JR12 505 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 ARMC3Q5W041 872 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 SDE2Q6IQ49 451 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 KIAA1211LQ6NV74 962 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 KYAT3Q6YP21 454 aaKnown RBP18.77■□□□□ 0.6
SMPD1-203ENST00000527275 MMAAQ8IVH4 418 aaKnown RBP18.77■□□□□ 0.6
SMPD1-203ENST00000527275 RPLP0P6Q8NHW5 317 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 RANBP9Q96S59 729 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 PLCD4Q9BRC7 762 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 MCMBPQ9BTE3 642 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 SNX15Q9NRS6 342 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 KLHL14Q9P2G3 628 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 MUTYHQ9UIF7 546 aa18.77■□□□□ 0.6
SMPD1-203ENST00000527275 NCOR1O75376 2440 aa18.77■□□□□ 0.59
SMPD1-203ENST00000527275 AURKAO14965 403 aa18.76■□□□□ 0.59
SMPD1-203ENST00000527275 SYNCRIPO60506 623 aaKnown RBP18.76■□□□□ 0.59
SMPD1-203ENST00000527275 GLRA3O75311 464 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms