RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 GPR63Q9BZJ6 419 aa20.73■□□□□ 0.91
CD44-222ENST00000526025 ZDHHC5Q9C0B5 715 aa20.73■□□□□ 0.91
CD44-222ENST00000526025 CASS4Q9NQ75 786 aa20.73■□□□□ 0.91
CD44-222ENST00000526025 AASDHPPTQ9NRN7 309 aa20.73■□□□□ 0.91
CD44-222ENST00000526025 GPR27Q9NS67 375 aa20.73■□□□□ 0.91
CD44-222ENST00000526025 FAM187AA6NFU0 413 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 KHNYNO15037 678 aaKnown RBP20.72■□□□□ 0.91
CD44-222ENST00000526025 CRTAMO95727 393 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 PIRTP0C851 137 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 IGFALSP35858 605 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 ETV3P41162 512 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 RABIFP47224 123 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 VPS41P49754 854 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 SARNPP82979 210 aaKnown RBP20.72■□□□□ 0.91
CD44-222ENST00000526025 OLIG2Q13516 323 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 TRIM61Q5EBN2 209 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 PPP1R21Q6ZMI0 780 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 Q6ZVL8 140 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 GLT6D1Q7Z4J2 308 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 PCGF5Q86SE9 256 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 MCUQ8NE86 351 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 DTX3LQ8TDB6 740 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 BLOC1S5Q8TDH9 187 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 EID2BQ96D98 161 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 BMFQ96LC9 184 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 FZD3Q9NPG1 666 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.72■□□□□ 0.91
CD44-222ENST00000526025 ASIC3Q9UHC3 531 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 SHOC2Q9UQ13 582 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 ZNF292O60281 2723 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 GVINP1Q7Z2Y8 2422 aa20.72■□□□□ 0.91
CD44-222ENST00000526025 PIEZO1Q92508 2521 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 C2orf81A6NN90 581 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 NDC80O14777 642 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 HOXC4P09017 264 aaPredicted RBP20.71■□□□□ 0.91
CD44-222ENST00000526025 TSHRP16473 764 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 PFN3P60673 137 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 LAMB3Q13751 1172 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 DENND2CQ68D51 928 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 CPT1BQ92523 772 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 KLHDC7BQ96G42 594 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 PLEKHG4BQ96PX9 1271 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 NUSAP1Q9BXS6 441 aaKnown RBP20.71■□□□□ 0.91
CD44-222ENST00000526025 ABCG8Q9H221 673 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 MBNL1Q9NR56 388 aaKnown RBP20.71■□□□□ 0.91
CD44-222ENST00000526025 SEMA4GQ9NTN9 838 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 IL17CQ9P0M4 197 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 TMEM131Q92545 1883 aa20.71■□□□□ 0.91
CD44-222ENST00000526025 ADAMTS9Q9P2N4 1935 aa20.7■□□□□ 0.91
CD44-222ENST00000526025 POM121BA6NF01 834 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 ESPNB1AK53 854 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 SMAPO00193 183 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 TLR4O00206 839 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 AURKAO14965 403 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 TTI1O43156 1089 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 WNT1P04628 370 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 SYPP08247 313 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 MLNP12872 115 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 LPOP22079 712 aaPredicted RBP20.7■□□□□ 0.9
CD44-222ENST00000526025 TGM1P22735 817 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 IVDP26440 423 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 DEKP35659 375 aaKnown RBP20.7■□□□□ 0.9
CD44-222ENST00000526025 TRIM23P36406 574 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 ADCY8P40145 1251 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 C2orf54Q08AI8 447 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 SPEM2Q0P670 501 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 HENMT1Q5T8I9 393 aaKnown RBP20.7■□□□□ 0.9
CD44-222ENST00000526025 PDPK2PQ6A1A2 396 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 LRRC8BQ6P9F7 803 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 IL27RAQ6UWB1 636 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 HOOK3Q86VS8 718 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 PPIL6Q8IXY8 311 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 DNAAF3Q8N9W5 541 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 OR52K1Q8NGK4 314 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 AP2M1Q96CW1 435 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 RANBP9Q96S59 729 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 FAM83DQ9H4H8 585 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 RIMKLBQ9ULI2 386 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 PKP3Q9Y446 797 aa20.7■□□□□ 0.9
CD44-222ENST00000526025 A0A0U1RQS6 177 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 PATE3B3GLJ2 98 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 DNALI1O14645 258 aaPredicted RBP20.69■□□□□ 0.9
CD44-222ENST00000526025 GFRA3O60609 400 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 CFIP05156 583 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 THEGLP0DJG4 465 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 PSMA3P25788 255 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 CSNK1EP49674 416 aaKnown RBP20.69■□□□□ 0.9
CD44-222ENST00000526025 C21orf59P57076 290 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 CLDN2P57739 230 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 RNASEH2BQ5TBB1 312 aaKnown RBP20.69■□□□□ 0.9
CD44-222ENST00000526025 PNCKQ6P2M8 343 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 ADAMTSL4Q6UY14 1074 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 NAT8LQ8N9F0 302 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 PEX13Q92968 403 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 MYOCQ99972 504 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 ERVMER34-1Q9H9K5 563 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 XAB2Q9HCS7 855 aaKnown RBP20.69■□□□□ 0.9
CD44-222ENST00000526025 CA5BQ9Y2D0 317 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 ANKRD6Q9Y2G4 727 aa20.69■□□□□ 0.9
CD44-222ENST00000526025 WDR87Q6ZQQ6 2873 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms