RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CXorf49A8MYA2 514 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 WASH3PC4AMC7 463 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 SLC7A4O43246 635 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 EDF1O60869 148 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 ATG13O75143 517 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 H2AFYO75367 372 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 CNTN5O94779 1100 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 LUC7L3O95232 432 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 PENKP01210 267 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 ITGA2BP08514 1039 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 VIMP08670 466 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 SERPINF2P08697 491 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 CISD3P0C7P0 127 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 CREB1P16220 341 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 TAC1P20366 129 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 EIF2DP41214 584 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 SKIV2L2P42285 1042 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 CSNK1DP48730 415 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 DGKGP49619 791 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 SERPINH1P50454 418 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 KPNA2P52292 529 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 DGKEP52429 567 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 PRKAA2P54646 552 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 HNRNPH2P55795 449 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 WNT3AP56704 352 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 RPL26P61254 145 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 PDE1BQ01064 536 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 ZNF177Q13360 481 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 SIM2Q14190 667 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 ZNF235Q14590 738 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 EFTUD2Q15029 972 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS11-201ENST00000524454 CCDC153Q494R4 210 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 FBXO43Q4G163 708 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 LACTB2Q53H82 288 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 ATG16L1Q676U5 607 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 TRMT10BQ6PF06 316 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 LVRNQ6Q4G3 990 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 CAPN12Q6ZSI9 719 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 CEP68Q76N32 757 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 SYT13Q7L8C5 426 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 SPATA21Q7Z572 469 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 KBTBD6Q86V97 674 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 WDR5BQ86VZ2 330 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 KCNMB4Q86W47 210 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 LONP2Q86WA8 852 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 RASSF3Q86WH2 238 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 KIAA2013Q8IYS2 634 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 LRRC34Q8IZ02 419 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 KIRREL3Q8IZU9 778 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 LGI2Q8N0V4 545 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 C4orf33Q8N1A6 199 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 CFAP52Q8N1V2 620 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 TAB3Q8N5C8 712 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 ZNF513Q8N8E2 541 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 DCAF4L2Q8NA75 395 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 TSTD1Q8NFU3 115 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 ARRDC2Q8TBH0 407 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 RDH11Q8TC12 318 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 TCP10LQ8TDR4 215 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 HMGB4Q8WW32 186 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 SREK1Q8WXA9 508 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 SORCS1Q8WY21 1168 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 ACDQ96AP0 544 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 ZNF669Q96BR6 464 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 ZNF419Q96HQ0 510 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 PRICKLE1Q96MT3 831 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 C7orf26Q96N11 449 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 CDK15Q96Q40 435 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 GPR22Q99680 433 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 CEP41Q9BYV8 373 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 RHOJQ9H4E5 214 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 SMOC1Q9H4F8 434 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 FAM96AQ9H5X1 160 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 ACTR5Q9H9F9 607 aaPredicted RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 SMYD2Q9NRG4 433 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 CACNA2D2Q9NY47 1150 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 MARK1Q9P0L2 795 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 SIRPGQ9P1W8 387 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 NCDNQ9UBB6 729 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 MMP17Q9ULZ9 603 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 RPL26L1Q9UNX3 145 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 ANKRD6Q9Y2G4 727 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 ARL2BPQ9Y2Y0 163 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 VPS13AQ96RL7 3174 aa7.1□□□□□ -1.27
VPS11-201ENST00000524454 MYO18AQ92614 2054 aaKnown RBP7.1□□□□□ -1.27
VPS11-201ENST00000524454 THADAQ6YHU6 1953 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TNRC6BQ9UPQ9 1833 aaKnown RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 A0A1W2PPM1 405 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TCRBV21S2A2A0A5A6 115 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 HMX2A2RU54 273 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 ERICH4A6NGS2 130 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TCP11X1B4DZS4 312 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 AXIN1O15169 862 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 HNRNPCL1O60812 293 aaKnown RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 TBL1XO60907 577 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 RPP40O75818 363 aaKnown RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 APBB3O95704 486 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 ALDOAP04075 364 aaKnown RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 CYBBP04839 570 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms