RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 CXorf57Q6NSI4 855 aaKnown RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 ZNF549Q6P9A3 640 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 TMEM207Q6UWW9 146 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 SHKBP1Q8TBC3 707 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 SLC26A7Q8TE54 656 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 WBP2Q969T9 261 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 CDKN2AIPNLQ96HQ2 116 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 TRPC7Q9HCX4 862 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 PDP2Q9P2J9 529 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 PRPF19Q9UMS4 504 aaKnown RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 ASB3Q9Y575 518 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 TYW5A2RUC4 315 aaKnown RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 RGSL1A5PLK6 1076 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 C2orf81A6NN90 581 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 TMEM233B4DJY2 109 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 TBL1XO60907 577 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 C1RP00736 705 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 HNRNPLP14866 589 aaKnown RBP eCLIP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 LAG3P18627 525 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 RFC2P35250 354 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 ERFP50548 548 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 SUOXP51687 545 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 SATB1Q01826 763 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 SULT2A1Q06520 285 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 C16orf89Q6UX73 402 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 CARNMT1Q8N4J0 409 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 HJURPQ8NCD3 748 aaPredicted RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 LPCAT1Q8NF37 534 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 PYDC1Q8WXC3 89 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 CATSPER2Q96P56 530 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 LENG8Q96PV6 779 aaPredicted RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 AARSD1Q9BTE6 412 aaKnown RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 ADGRE3Q9BY15 652 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 ZNF385DQ9H6B1 395 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 STOML2Q9UJZ1 356 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 TBX21Q9UL17 535 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 G3BP2Q9UN86 482 aaKnown RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 RAI2Q9Y5P3 530 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 KIAA1671Q9BY89 1806 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 H0Y626 953 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 ZMPSTE24O75844 475 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 TMCC1O94876 653 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 PENKP01210 267 aaPredicted RBP13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 JUNP05412 331 aaKnown RBP13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 CD1DP15813 335 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 PLK1P53350 603 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 NFKB2Q00653 900 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 PEX6Q13608 980 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 HERC3Q15034 1050 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 FAM117BQ6P1L5 589 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 DNAJB7Q7Z6W7 309 aaPredicted RBP13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 CUZD1Q86UP6 607 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 SNX32Q86XE0 403 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 PDSS2Q86YH6 399 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 HPS6Q86YV9 775 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 SPNS2Q8IVW8 549 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 OR4K2Q8NGD2 314 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 RP9Q8TA86 221 aaKnown RBP13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 TOP1MTQ969P6 601 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 PHF21BQ96EK2 531 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 NSMCE3Q96MG7 304 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 SERPINI1Q99574 410 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 TRMOQ9BU70 441 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 YIPF3Q9GZM5 350 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 SPG21Q9NZD8 308 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 VPS28Q9UK41 221 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 ATP11BQ9Y2G3 1177 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 INSL5Q9Y5Q6 135 aa13.75□□□□□ -0.21
LDLRAD3-202ENST00000524419 SDHDO14521 159 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 IMPDH1P20839 514 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 RPL26P61254 145 aaKnown RBP13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 ARF5P84085 180 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 GALNT1Q10472 559 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 DDX53Q86TM3 631 aaKnown RBP13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 ISCA2Q86U28 154 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 ITIH5Q86UX2 942 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 KBTBD6Q86V97 674 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 TCEAL8Q8IYN2 117 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 ZNF689Q96CS4 500 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 L3HYPDHQ96EM0 354 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 ZFRQ96KR1 1074 aaKnown RBP13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 TRAPPC9Q96Q05 1148 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 TCF12Q99081 682 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 KLHL4Q9C0H6 718 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 CCDC68Q9H2F9 335 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 TMEM39AQ9NV64 488 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 ABHD14A-ACY1A0A1B0GW23 586 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 UBA6A0AVT1 1052 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 CARNS1A5YM72 827 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 CASQ2O14958 399 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 SNAP91O60641 907 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 NDUFS3O75489 264 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 RHOBTB1O94844 696 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 PRLP01236 227 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 F11P03951 625 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 LYNP07948 512 aa13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 ZNF37AP17032 561 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD3-202ENST00000524419 LPOP22079 712 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms