RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 VCX3BQ9H321 246 aa10.75□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GKN1Q9NS71 199 aa10.75□□□□□ -0.69
RAB11FIP1-204ENST00000522774 COMMD8Q9NX08 183 aa10.75□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CACNA2D2Q9NY47 1150 aa10.75□□□□□ -0.69
RAB11FIP1-204ENST00000522774 UBA2Q9UBT2 640 aaPredicted RBP10.75□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GIMAP2Q9UG22 337 aa10.75□□□□□ -0.69
RAB11FIP1-204ENST00000522774 MED16Q9Y2X0 877 aa10.75□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CAPN8A6NHC0 703 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 E7ENX8 843 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SMIM24O75264 130 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CDK14O94921 469 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PRLP01236 227 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 INHAP05111 366 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 UQCRBP14927 111 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PMLP29590 882 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CDKN1CP49918 316 aaPredicted RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 FOXA1P55317 472 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PDAP1Q13442 181 aaKnown RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 BTG3Q14201 252 aaPredicted RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PTPRRQ15256 657 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PFKFB4Q16877 469 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TYSND1Q2T9J0 566 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 FBXO48Q5FWF7 155 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ACBD5Q5T8D3 534 aaPredicted RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LARP4Q71RC2 724 aaKnown RBP eCLIP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 WBP2Q969T9 261 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RMDN1Q96DB5 314 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PSKH2Q96QS6 385 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TRMOQ9BU70 441 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 MRPL1Q9BYD6 325 aaKnown RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 NACA2Q9H009 215 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ADA2Q9NZK5 511 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SEPT3Q9UH03 358 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 A0A0U1RQS6 177 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 H7C4K7 107 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 COCHO43405 550 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GPC4O75487 556 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 BCAS2O75934 225 aaPredicted RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ALDOCP09972 364 aaKnown RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 OGNP20774 298 aaKnown RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 FMO4P31512 558 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 OXCT1P55809 520 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LRP8Q14114 963 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 FBXL19Q6PCT2 694 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PAOXQ6QHF9 649 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 NPAS4Q8IUM7 802 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CRIPAKQ8N1N5 446 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 C19orf60Q96EN9 201 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ATOH8Q96SQ7 321 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CYP2S1Q96SQ9 504 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 COPS7BQ9H9Q2 264 aaPredicted RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 NLE1Q9NVX2 485 aaPredicted RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 C6orf203Q9P0P8 240 aaPredicted RBP10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RIMS3Q9UJD0 308 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 FAM50BQ9Y247 325 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 DTNAQ9Y4J8 743 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SCN5AQ14524 2016 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ANKRD36A6QL64 1941 aa10.74□□□□□ -0.69
RAB11FIP1-204ENST00000522774 A0A1B0GTL3 188 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ZNF840PA6NDX5 716 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TSPAN3O60637 253 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PENKP01210 267 aaPredicted RBP10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 VCLP18206 1134 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CR2P20023 1033 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 OR1D2P34982 312 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SLC11A2P49281 568 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CDH4P55283 916 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SMARCB1Q12824 385 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RALGDSQ12967 914 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 MMEL1Q495T6 779 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PAQR3Q6TCH7 311 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 C16orf59Q7L2K0 433 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GLT6D1Q7Z4J2 308 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GCNAQ96QF7 691 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 KCNA7Q96RP8 456 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PCDHAC1Q9H158 963 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 UTP6Q9NYH9 597 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GALPQ9UBC7 116 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ASB3Q9Y575 518 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 DNAJC15Q9Y5T4 150 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TRIM38O00635 465 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 INSIG1O15503 277 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 KDELR3O43731 214 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PEX1O43933 1283 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RHOBTB1O94844 696 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 IRF1P10914 325 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CORO1AP31146 461 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 PEX19P40855 299 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 XIAPP98170 497 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ELAVL2Q12926 359 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LAMB3Q13751 1172 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ADGRE1Q14246 886 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CYTH1Q15438 398 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LAYNQ6UX15 382 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 BBS5Q8N3I7 341 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 C2orf15Q8WU43 125 aaKnown RBP10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LPGAT1Q92604 370 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 DCUN1D1Q96GG9 259 aa10.73□□□□□ -0.69
RAB11FIP1-204ENST00000522774 VN1R3Q9BXE9 311 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms