RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SCNM1Q9BWG6 230 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 TSGA10Q9BZW7 698 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 ABCG8Q9H221 673 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 KCNF1Q9H3M0 494 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 GOLGA6AQ9NYA3 693 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 SPO11Q9Y5K1 396 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 U3KQA8 63 aa17.84■□□□□ 0.45
CLK4-211ENST00000522556 HACD1B0YJ81 288 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 ANKRD66B4E2M5 251 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 PSMD11O00231 422 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 AURKAO14965 403 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 KRT86O43790 486 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 TRIM23P36406 574 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 ACADVLP49748 655 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 RPL26P61254 145 aaKnown RBP17.83■□□□□ 0.44
CLK4-211ENST00000522556 XRCC4Q13426 336 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 PTK2BQ14289 1009 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 FAXCQ5TGI0 409 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 PID1Q7Z2X4 250 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 UBL4BQ8N7F7 174 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 ATG4AQ8WYN0 398 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 WDR92Q96MX6 357 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 LYSMD1Q96S90 227 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 WDR26Q9H7D7 661 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 SUDS3Q9H7L9 328 aaPredicted RBP17.83■□□□□ 0.44
CLK4-211ENST00000522556 HAUS2Q9NVX0 235 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 RPL26L1Q9UNX3 145 aaKnown RBP17.83■□□□□ 0.44
CLK4-211ENST00000522556 SHOC2Q9UQ13 582 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 PPP2R2CQ9Y2T4 447 aa17.83■□□□□ 0.44
CLK4-211ENST00000522556 CASC3O15234 703 aaKnown RBP17.82■□□□□ 0.44
CLK4-211ENST00000522556 AQP9O43315 295 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 FUCA1P04066 466 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 TSHRP16473 764 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 CA4P22748 312 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 WNT3AP56704 352 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 KIAA1024LP59773 190 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 SRP54P61011 504 aaKnown RBP17.82■□□□□ 0.44
CLK4-211ENST00000522556 SHC2P98077 582 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 PPARDQ03181 441 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 CDK18Q07002 472 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 RAET1GQ6H3X3 334 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 DHRS13Q6UX07 377 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 SFTPA2Q8IWL1 248 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 CCDC110Q8TBZ0 833 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 ADAMTS14Q8WXS8 1223 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 MRGPRX2Q96LB1 330 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 MLPHQ9BV36 600 aaPredicted RBP17.82■□□□□ 0.44
CLK4-211ENST00000522556 USP29Q9HBJ7 922 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 KLQ9UEF7 1012 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 RSPH14Q9UHP6 348 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 ANGPTL2Q9UKU9 493 aa17.82■□□□□ 0.44
CLK4-211ENST00000522556 H3BM21 787 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 TOR1BO14657 336 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 KCNN4O15554 427 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 TJP3O95049 919 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 NDST3O95803 873 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 ZNF30P17039 623 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 PSMB4P28070 264 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 POLD2P49005 469 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 HK3P52790 923 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 GDF10P55107 478 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 CDK3Q00526 305 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 SLC14A2Q15849 920 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 MEI1Q5TIA1 1274 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 DARS2Q6PI48 645 aaKnown RBP17.81■□□□□ 0.44
CLK4-211ENST00000522556 CDKL3Q8IVW4 592 aaPredicted RBP17.81■□□□□ 0.44
CLK4-211ENST00000522556 SLC25A41Q8N5S1 370 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 IPMKQ8NFU5 416 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 CCL4L1Q8NHW4 92 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 AP2M1Q96CW1 435 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 APOLD1Q96LR9 279 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 FCRL5Q96RD9 977 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 RIOK2Q9BVS4 552 aaKnown RBP17.81■□□□□ 0.44
CLK4-211ENST00000522556 TEX101Q9BY14 249 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 GBA3Q9H227 469 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 NLGN3Q9NZ94 848 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 FAM153AQ9UHL3 310 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 APOBEC2Q9Y235 224 aaKnown RBP17.81■□□□□ 0.44
CLK4-211ENST00000522556 ZNF711Q9Y462 761 aa17.81■□□□□ 0.44
CLK4-211ENST00000522556 COL27A1Q8IZC6 1860 aaPredicted RBP17.81■□□□□ 0.44
CLK4-211ENST00000522556 AKAP13Q12802 2813 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 FAM149AA5PLN7 773 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 FADS2P1A8MWK0 482 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 CACNB4O00305 520 aaPredicted RBP17.8■□□□□ 0.44
CLK4-211ENST00000522556 MTSS1O43312 755 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 MYCLP1P12525 358 aaPredicted RBP17.8■□□□□ 0.44
CLK4-211ENST00000522556 NFKBIAP25963 317 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 SPINT3P49223 89 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 KCTD19Q17RG1 926 aaPredicted RBP17.8■□□□□ 0.44
CLK4-211ENST00000522556 SIRPB2Q5JXA9 342 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 ANKRD20A2Q5SQ80 823 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 ANKRD20A1Q5TYW2 823 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 ANKRD20A3Q5VUR7 823 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 ALS2CLQ60I27 953 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 DOK6Q6PKX4 331 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 ZNF662Q6ZS27 426 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 NDUFAF2Q8N183 169 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 OR56A4Q8NGH8 313 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 CNTNAP3BQ96NU0 1288 aa17.8■□□□□ 0.44
CLK4-211ENST00000522556 ADGRE3Q9BY15 652 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms