RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CRTC1Q6UUV9 634 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 CNTN4Q8IWV2 1026 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 SIX5Q8N196 739 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 OR4K2Q8NGD2 314 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 OR13C4Q8NGS5 318 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 OR2W6PQ8NHA6 318 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 CALML6Q8TD86 181 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 SLC44A1Q8WWI5 657 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 SCG3Q8WXD2 468 aaKnown RBP13.06□□□□□ -0.32
CPNE3-205ENST00000522240 FAM131CQ96AQ9 280 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 SGSM3Q96HU1 749 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 SMIM14Q96QK8 99 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 PAFAH2Q99487 392 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 DHRS4Q9BTZ2 278 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 MFSD1Q9H3U5 465 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 C20orf96Q9NUD7 363 aaPredicted RBP13.06□□□□□ -0.32
CPNE3-205ENST00000522240 VPS18Q9P253 973 aa13.06□□□□□ -0.32
CPNE3-205ENST00000522240 NFKBIL1Q9UBC1 381 aaPredicted RBP13.06□□□□□ -0.32
CPNE3-205ENST00000522240 CACNA1HO95180 2353 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 CCDC78A2IDD5 438 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 AGPSO00116 658 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 RASGRF2O14827 1237 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 AREL1O15033 823 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 MID1O15344 667 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 SPINT1O43278 529 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 ATG13O75143 517 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 CDH16O75309 829 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 VAPBO95292 243 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 SLC4A1P02730 911 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 DNTTP04053 509 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 P2RY2P41231 377 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 ARSDP51689 593 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 METAP1P53582 386 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 PTPN5P54829 565 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 SFSWAPQ12872 951 aaKnown RBP13.05□□□□□ -0.32
CPNE3-205ENST00000522240 RALGDSQ12967 914 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 UBXN2BQ14CS0 331 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 EFTUD2Q15029 972 aaKnown RBP eCLIP13.05□□□□□ -0.326e-7■■■□□ 16.6
CPNE3-205ENST00000522240 KRT71Q3SY84 523 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 POM121L1PQ3SYA9 428 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 TTC31Q49AM3 519 aaPredicted RBP13.05□□□□□ -0.32
CPNE3-205ENST00000522240 CEP85LQ5SZL2 805 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 PIP5KL1Q5T9C9 394 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 ZDHHC20Q5W0Z9 365 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 FBXL19Q6PCT2 694 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 Q6ZS52 159 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 SYT13Q7L8C5 426 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 TTC7BQ86TV6 843 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 TSPAN33Q86UF1 283 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 SLC26A11Q86WA9 606 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 LRRC6Q86X45 466 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 CBARPQ8N350 705 aaPredicted RBP13.05□□□□□ -0.32
CPNE3-205ENST00000522240 PBXIP1Q96AQ6 731 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 SH3GL2Q99962 352 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 TBC1D17Q9HA65 648 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 SMYD2Q9NRG4 433 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 RAD18Q9NS91 495 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 EURLQ9NYK6 297 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 PKD2L2Q9NZM6 624 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 ZFATQ9P243 1243 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 PSMC3IPQ9P2W1 217 aaPredicted RBP13.05□□□□□ -0.32
CPNE3-205ENST00000522240 LGALS13Q9UHV8 139 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 MUTYHQ9UIF7 546 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 GGT7Q9UJ14 662 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 ZNF180Q9UJW8 692 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 KCTD3Q9Y597 815 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 ZDBF2Q9HCK1 2354 aa13.05□□□□□ -0.32
CPNE3-205ENST00000522240 PLXNA2O75051 1894 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 RGSL1A5PLK6 1076 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 GOLGA6L10A6NI86 522 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 OPA1O60313 960 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 CLDN7O95471 211 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 INHBAP08476 426 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 C1SP09871 688 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 ELFN1P0C7U0 828 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 ERVK-10P10266 1014 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 OGNP20774 298 aaKnown RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 GCAP28676 217 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 SPAM1P38567 509 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 DGKEP52429 567 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 CSE1LP55060 971 aaKnown RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 DCDC1P59894 354 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 FAM193AP78312 1265 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 ZXDAP98168 799 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 CNTN1Q12860 1018 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 ILF2Q12905 390 aaKnown RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 GPS2Q13227 327 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 THOC5Q13769 683 aaKnown RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 PTPRRQ15256 657 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 CRY1Q16526 586 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 TMEM52BQ4KMG9 183 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 LRRC73Q5JTD7 316 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 AGBL4Q5VU57 503 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 KIAA0408Q6ZU52 694 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 GALNT7Q86SF2 657 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 ALYREFQ86V81 257 aaKnown RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 KBTBD6Q86V97 674 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 CTAGE3PQ8IX95 158 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms