RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ZNF567Q8N184 647 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 TRPM4Q8TD43 1214 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 NOL11Q9H8H0 719 aaKnown RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 CNTNAP1P78357 1384 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 SLC28A1O00337 649 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 TIPRLO75663 272 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 NELFEP18615 380 aaKnown RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 PTPN3P26045 913 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 ADSLP30566 484 aaPredicted RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 RPS6KA3P51812 740 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 MBTD1Q05BQ5 628 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 GALNT3Q14435 633 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 RGS21Q2M5E4 152 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 MTSS1LQ765P7 747 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 GPR180Q86V85 440 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 PDSS2Q86YH6 399 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 TBC1D21Q8IYX1 336 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 CNTD1Q8N815 330 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 PTCD2Q8WV60 388 aaKnown RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 EME2A4GXA9 379 aaPredicted RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 KPNA3O00505 521 aaPredicted RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 ITGAXP20702 1163 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 CCNFP41002 786 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 RAB14P61106 215 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 BTG3Q14201 252 aaPredicted RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 ACOX1Q15067 660 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 DLG2Q15700 870 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 MTX3Q5HYI7 312 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 NOMO2Q5JPE7 1267 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 PAGE2BQ5JRK9 111 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 ATAD3BQ5T9A4 648 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 CCDC106Q9BWC9 280 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 NDEL1Q9GZM8 345 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 MKS1Q9NXB0 559 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 GNEQ9Y223 722 aaKnown RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 PTPRJQ12913 1337 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 SERPINI2O75830 405 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 PGK1P00558 417 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 ZBTB48P10074 688 aaPredicted RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 MYL12AP19105 171 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 PSMD5Q16401 504 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 DGKKQ5KSL6 1271 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 HECTD2Q5U5R9 776 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 FSTL4Q6MZW2 842 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 DENND1CQ8IV53 801 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 AMER2Q8N7J2 671 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 CENPIQ92674 756 aaPredicted RBP13.82□□□□□ -0.2
SYNPO-205ENST00000522122 LINGO1Q96FE5 620 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 PLEKHG4BQ96PX9 1271 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 MIPEPQ99797 713 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 OSBPL6Q9BZF3 934 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 GBA3Q9H227 469 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 TLE6Q9H808 572 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 ZNHIT2Q9UHR6 403 aa13.82□□□□□ -0.2
SYNPO-205ENST00000522122 LOC100506127A0A0U1RQW1 187 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 FAM25AB3EWG3 89 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 FAM25CB3EWG5 89 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 FAM25GB3EWG6 89 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 TLR5O60602 858 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 CPSF6Q16630 551 aaKnown RBP eCLIP13.81□□□□□ -0.2
SYNPO-205ENST00000522122 B3GNT9Q6UX72 402 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 TPGS1Q6ZTW0 290 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 IGDCC3Q8IVU1 814 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 CDK20Q8IZL9 346 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 CCDC185Q8N715 623 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 ZNF781Q8N8C0 355 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 ATL1Q8WXF7 558 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 CIB1Q99828 191 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 NOL6Q9H6R4 1146 aaKnown RBP13.81□□□□□ -0.2
SYNPO-205ENST00000522122 ACSS2Q9NR19 701 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 PLK2Q9NYY3 685 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 AGO1Q9UL18 857 aaKnown RBP13.81□□□□□ -0.2
SYNPO-205ENST00000522122 SF3B1O75533 1304 aaKnown RBP eCLIP13.81□□□□□ -0.2
SYNPO-205ENST00000522122 MOXD2PA6NHM9 499 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 A6NHS1 94 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 MYL12BO14950 172 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 CCNA2P20248 432 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 CD52P31358 61 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 GRK4P32298 578 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 CENPAP49450 140 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 USP46P62068 366 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 SNRPD1P62314 119 aaKnown RBP13.81□□□□□ -0.2
SYNPO-205ENST00000522122 MAP2K5Q13163 448 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 RFX4Q33E94 735 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 MOB2Q70IA6 237 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 LPGAT1Q92604 370 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 BCO2Q9BYV7 579 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 ADCY6O43306 1168 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 ITM2AO43736 263 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 PCDH8O95206 1070 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 CRATP43155 626 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 GPD2P43304 727 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 PEX6Q13608 980 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 TMC5Q6UXY8 1006 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 PYROXD2Q8N2H3 581 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 MPP5Q8N3R9 675 aa13.81□□□□□ -0.2
SYNPO-205ENST00000522122 POP5Q969H6 163 aaKnown RBP13.81□□□□□ -0.2
SYNPO-205ENST00000522122 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms