RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CBWD6Q4V339 395 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 CBWD3Q5JTY5 395 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 CBWD5Q5RIA9 395 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 SNAP47Q5SQN1 464 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 OTUD1Q5VV17 481 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 ZNF517Q6ZMY9 492 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 INTS8Q75QN2 995 aaKnown RBP8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 TFAP2DQ7Z6R9 452 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 GRAMD1CQ8IYS0 662 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 CCDC150Q8NCX0 1101 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 KIAA1524Q8TCG1 905 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 CXorf40AQ8TE69 158 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 PNPLA2Q96AD5 504 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 ARHGEF26Q96DR7 871 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 TMX3Q96JJ7 454 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 CEP63Q96MT8 703 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 USP28Q96RU2 1077 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 SPON2Q9BUD6 331 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 C1QTNF7Q9BXJ2 289 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 TRIM8Q9BZR9 551 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 SIK2Q9H0K1 926 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 CUEDC2Q9H467 287 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 POPDC2Q9HBU9 364 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 DDIT4Q9NX09 232 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 COX16Q9P0S2 106 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 SLC12A6Q9UHW9 1150 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 PHTF1Q9UMS5 762 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 TRAF3IP3Q9Y228 551 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 DOCK4Q8N1I0 1966 aa8.88□□□□□ -0.99
TRAPPC9-212ENST00000521944 KRIT1O00522 736 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 POLR1CO15160 346 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 PRMT3O60678 531 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 PCCBP05166 539 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 PAEPP09466 180 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 SLC2A3P11169 496 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 GM2AP17900 193 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 CD33P20138 364 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 ITGA3P26006 1051 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 TRIM23P36406 574 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 KIAA1024LP59773 190 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 RNASE9P60153 205 aaKnown RBP8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 CTBSQ01459 385 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 MTM1Q13496 603 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 MIIPQ5JXC2 388 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 ATXN7L2Q5T6C5 722 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 SHC4Q6S5L8 630 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 TMEM270Q6UE05 265 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 LYPD4Q6UWN0 246 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 C6orf15Q6UXA7 325 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 GDF7Q7Z4P5 450 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 TMEM110Q86TL2 294 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 DEFB106AQ8N104 65 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 NETO2Q8NC67 525 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 FDCSPQ8NFU4 85 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 KAT5Q92993 513 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 ISG20Q96AZ6 181 aaKnown RBP8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 HSH2DQ96JZ2 352 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 SLC2A13Q96QE2 648 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 NUDT9Q9BW91 350 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 ULBP3Q9BZM4 244 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 ING2Q9H160 280 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 COQ4Q9Y3A0 265 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 ABCA4P78363 2273 aa8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC9-212ENST00000521944 SEC16AO15027 2179 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 IGLV3-10A0A075B6K4 115 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 ILVBLA1L0T0 632 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 PRSS38A1L453 326 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 A6NCN8 305 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 ARGFXA6NJG6 315 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 E5RJQ4 531 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 TGFBR3LH3BV60 316 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 PRICKLE3O43900 615 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 POP4O95707 220 aaKnown RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 SNRPB2P08579 225 aaKnown RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 HOXC4P09017 264 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 TFE3P19532 575 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 NR2F2P24468 414 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 ADH6P28332 368 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 ACVRL1P37023 503 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 MXI1P50539 228 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 RPS18P62269 152 aaKnown RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 DNM1Q05193 864 aaKnown RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 DNASE1L3Q13609 305 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 IL10RAQ13651 578 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 OCLNQ16625 522 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 NFIL3Q16649 462 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 EFHC1Q5JVL4 640 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 RETSATQ6NUM9 610 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 DENND1BQ6P3S1 775 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 WDR74Q6RFH5 385 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 GDPD4Q6W3E5 623 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 SLC47A2Q86VL8 602 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 RYBPQ8N488 228 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 IQUBQ8NA54 791 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 OR2AP1Q8NGE2 309 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 ATL2Q8NHH9 583 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 CT55Q8WUE5 264 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 INPP5DQ92835 1189 aa8.86□□□□□ -0.99
TRAPPC9-212ENST00000521944 DPYSL5Q9BPU6 564 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms