RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 LEMD2Q8NC56 503 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 PIH1D2Q8WWB5 315 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 LPGAT1Q92604 370 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 CCDC126Q96EE4 140 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 POMKQ9H5K3 350 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 MAGEE1Q9HCI5 957 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 ACSS2Q9NR19 701 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 TDP1Q9NUW8 608 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 SORCS3Q9UPU3 1222 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 STK38LQ9Y2H1 464 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZNF711Q9Y462 761 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 UBA6A0AVT1 1052 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 SOBPA7XYQ1 873 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 H7C0S8 307 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 CLASP2O75122 1294 aaKnown RBP18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 XYLBO75191 536 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 NDUFS3O75489 264 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 PIGNO95427 931 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 IGSF6O95976 241 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 HNRNPA1P09651 372 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 MPSTP25325 297 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 HK2P52789 917 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 RPL26P61254 145 aaKnown RBP18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 PRKAA1Q13131 559 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 TBCCQ15814 346 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 TMEM25Q86YD3 366 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 CCDC106Q9BWC9 280 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 COG4Q9H9E3 785 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 BPIFA1Q9NP55 256 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 NCKIPSDQ9NZQ3 722 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 RPL26L1Q9UNX3 145 aaKnown RBP18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 VPS9D1Q9Y2B5 631 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 HTRA2O43464 458 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 NPHS1O60500 1241 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 ESRRAP11474 423 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 CTPS1P17812 591 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 TFEBP19484 476 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 HLA-FP30511 346 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 CCR10P46092 362 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 RPL14P50914 215 aaKnown RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 VWA5B1Q5TIE3 1220 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 EPGNQ6UW88 154 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 PIWIL4Q7Z3Z4 852 aaKnown RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 TREML1Q86YW5 311 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 CCNYL1Q8N7R7 359 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 UTP4Q969X6 686 aaKnown RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 TBC1D10AQ9BXI6 508 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 GPR63Q9BZJ6 419 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 PKP3Q9Y446 797 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 MTF2Q9Y483 593 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 NEMP2A6NFY4 417 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 PFDN6O15212 129 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 DIAPH2O60879 1101 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 SOCS5O75159 536 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZNF821O75541 412 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 PENKP01210 267 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 RB1P06400 928 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 PDAP1Q13442 181 aaKnown RBP18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 PEX6Q13608 980 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 PSAPL1Q6NUJ1 521 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 TRIM67Q6ZTA4 783 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 LSMEM2Q8N112 164 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 AGR3Q8TD06 166 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 CCDC68Q9H2F9 335 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 TNKS2Q9H2K2 1166 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 TLE6Q9H808 572 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 IL17CQ9P0M4 197 aa18.44■□□□□ 0.54
TRAPPC9-210ENST00000521667 A0A0U1RQS6 177 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 A8MT66 165 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 MATN2O00339 956 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 SRP72O76094 671 aaKnown RBP18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 IPO13O94829 963 aaKnown RBP18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 SNUPNO95149 360 aaKnown RBP18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 PRAMEF12O95522 483 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 ALPIP09923 528 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 SRCP12931 536 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 CD1DP15813 335 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZNF37AP17032 561 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 FMO4P31512 558 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 HMGCLP35914 325 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 SERPINB5P36952 375 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 CTSOP43234 321 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 TTPAP49638 278 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 CDKN1CP49918 316 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 NTHL1P78549 312 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 FUT11Q495W5 492 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZRANB3Q5FWF4 1079 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 PRSS36Q5K4E3 855 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 DGKKQ5KSL6 1271 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 LYSMD3Q7Z3D4 306 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 ISCA2Q86U28 154 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 PIANPQ8IYJ0 282 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 OR2AP1Q8NGE2 309 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 RPL10LQ96L21 214 aaKnown RBP18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 ALG9Q9H6U8 611 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 ATP13A3Q9H7F0 1226 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 GBF1Q92538 1859 aa18.43■□□□□ 0.54
TRAPPC9-210ENST00000521667 NEDD8-MDP1E9PL57 170 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 RHOBTB1O94844 696 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 KCNA5P22460 613 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms