RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 NOVA1P51513 510 aaKnown RBP6.18□□□□□ -1.42
PABPC1-216ENST00000520868 DGKEP52429 567 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 NKX6-1P78426 367 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-216ENST00000520868 GTF2BQ00403 316 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 TSPY1Q01534 308 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 SMARCB1Q12824 385 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 DMC1Q14565 340 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 PDGFRLQ15198 375 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 ELF2Q15723 593 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 TMEM119Q4V9L6 283 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 RILPL1Q5EBL4 403 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 RBM20Q5T481 1227 aaKnown RBP6.18□□□□□ -1.42
PABPC1-216ENST00000520868 TSTD2Q5T7W7 516 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 SFRP4Q6FHJ7 346 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-216ENST00000520868 TTC30AQ86WT1 665 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 LRRC15Q8TF66 581 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 C2orf15Q8WU43 125 aaKnown RBP6.18□□□□□ -1.42
PABPC1-216ENST00000520868 CD101Q93033 1021 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 FAM136AQ96C01 138 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 SLC35A4Q96G79 324 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 CALML4Q96GE6 196 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 HAPLN3Q96S86 360 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 FIZ1Q96SL8 496 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 EDEM2Q9BV94 578 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 AMBRA1Q9C0C7 1298 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 LINC00597Q9H2U6 94 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 ECT2Q9H8V3 914 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 KIF9Q9HAQ2 790 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 BLOC1S4Q9NUP1 217 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 DUS2Q9NX74 493 aaKnown RBP6.18□□□□□ -1.42
PABPC1-216ENST00000520868 AGO2Q9UKV8 859 aaKnown RBP6.18□□□□□ -1.42
PABPC1-216ENST00000520868 PNMA8BQ9ULN7 279 aaPredicted RBP6.18□□□□□ -1.42
PABPC1-216ENST00000520868 DERAQ9Y315 318 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 PCDHGA5Q9Y5G8 931 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 WNT6Q9Y6F9 365 aa6.18□□□□□ -1.42
PABPC1-216ENST00000520868 FRYQ5TBA9 3013 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 BCLAF3A2AJT9 711 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 LRRC3CA6NJW4 275 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 H3BQV1 296 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 EIF5BO60841 1220 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 HUS1O60921 280 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 TBCAO75347 108 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 APBB3O95704 486 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 TOP3BO95985 862 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 AHSGP02765 367 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 PROS1P07225 676 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 PDGFRBP09619 1106 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 DHPSP49366 369 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 ZNF131P52739 623 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 RPL10AP62906 217 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 SHC2P98077 582 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 TFAMQ00059 246 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 PIN1Q13526 163 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 ZNF268Q14587 947 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 MTF1Q14872 753 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 KARSQ15046 597 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 NFE2Q16621 373 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 FBXO43Q4G163 708 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 DAB2IPQ5VWQ8 1189 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 ARL6IP4Q66PJ3 421 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 CRELD2Q6UXH1 353 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 SYT13Q7L8C5 426 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 SCN4BQ8IWT1 228 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 EFCAB13Q8IY85 973 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 GRAMD1CQ8IYS0 662 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 PDCL2Q8N4E4 241 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 CCDC33Q8N5R6 958 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 ARL14EPQ8N8R7 260 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 FAM46DQ8NEK8 389 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 TSTD1Q8NFU3 115 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 RASSF8Q8NHQ8 419 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 NOC3LQ8WTT2 800 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 OSCP1Q8WVF1 389 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 POMGNT1Q8WZA1 660 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 RAD54LQ92698 747 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 EXOC4Q96A65 974 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 SLC22A12Q96S37 553 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 DDX43Q9NXZ2 648 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 DDX56Q9NY93 547 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 GTF3C4Q9UKN8 822 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 L1RE1Q9UN81 338 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 C2CD2Q9Y426 696 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 ASPMQ8IZT6 3477 aa6.17□□□□□ -1.42
PABPC1-216ENST00000520868 PDCD11Q14690 1871 aaKnown RBP6.17□□□□□ -1.42
PABPC1-216ENST00000520868 LAMA1P25391 3075 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 TRAV19A0A0A6YYK7 116 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 LNP1A1A4G5 178 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 GOLGA8IPA6NC78 632 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 GOLGA8JA6NMD2 632 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 VWC2LB2RUY7 222 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 HCRTO43612 131 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 NOL4O94818 638 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 NXPH3O95157 252 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 IL18RAPO95256 599 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 KRT19P08727 400 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 ATXN1LP0C7T5 689 aaKnown RBP6.16□□□□□ -1.42
PABPC1-216ENST00000520868 ZFXP17010 805 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-216ENST00000520868 HDCP19113 662 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 BCKDHBP21953 392 aa6.16□□□□□ -1.42
PABPC1-216ENST00000520868 SCP2P22307 547 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms