RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 RGPD4Q7Z3J3 1758 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 STX16-NPEPL1H3BU86 382 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 COCHO43405 550 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 PKMP14618 531 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 ATP6V1B1P15313 513 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 AOC1P19801 751 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 KCTD11Q693B1 232 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 EPGNQ6UW88 154 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 DHDDSQ86SQ9 333 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 TRIML2Q8N7C3 387 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 GRIN3AQ8TCU5 1115 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 ZNF296Q8WUU4 475 aaPredicted RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 C1orf50Q9BV19 199 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 CCDC106Q9BWC9 280 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 POMPQ9Y244 141 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 NDUFAF1Q9Y375 327 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 YIPF1Q9Y548 306 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 MAGEA13PA6NCF6 341 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 G3V2L1 256 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 MATN2O00339 956 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 ADAM12O43184 909 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 PRAMEF11O60813 436 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 POLD2P49005 469 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 CYP4F8P98187 520 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 RALGDSQ12967 914 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 MIER2Q8N344 545 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 NKAPQ8N5F7 415 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 OLFM1Q99784 485 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 PLAC1Q9HBJ0 212 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 TTC3P53804 2025 aa10.15□□□□□ -0.79
MCF2-209ENST00000520602 A0A0U1RQS6 177 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 TNFRSF10BO14763 440 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 NBNO60934 754 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 TMCC1O94876 653 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 IGSF6O95976 241 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 CALRP27797 417 aaKnown RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 PPM1FP49593 454 aaPredicted RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 DDX39BQ13838 428 aaKnown RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 BOP1Q14137 746 aaKnown RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 FRG1Q14331 258 aaKnown RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 TTLL9Q3SXZ7 439 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 WLSQ5T9L3 541 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 IYDQ6PHW0 289 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 CAMK1DQ8IU85 385 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 OR56A4Q8NGH8 313 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 SDCCAG3Q96C92 435 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 PANX3Q96QZ0 392 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 MFSD1Q9H3U5 465 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 ZDHHC6Q9H6R6 413 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 EBF2Q9HAK2 575 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 S100A14Q9HCY8 104 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 FFAR3O14843 346 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 GPR42O15529 346 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 NIPSNAP2O75323 286 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 CXCL14O95715 111 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 PRSS56P0CW18 603 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 COL6A1P12109 1028 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 LBPP18428 481 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 FGFR3P22607 806 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 ACTR3P61158 418 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 IL27RAQ6UWB1 636 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
MCF2-209ENST00000520602 BEND5Q7L4P6 421 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 DET1Q7L5Y6 550 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 TMEM173Q86WV6 379 aaPredicted RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 CPNE9Q8IYJ1 553 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 ZNF461Q8TAF7 563 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 SORT1Q99523 831 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 CENPKQ9BS16 269 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 TRIM4Q9C037 500 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 PPM1HQ9ULR3 514 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 EME2A4GXA9 379 aaPredicted RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 C2orf78A6NCI8 922 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 CLASP2O75122 1294 aaKnown RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 SLC2A4P14672 509 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 ITGAXP20702 1163 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 GABRB3P28472 473 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 CCNG1P51959 295 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 DSC1Q08554 894 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 HSPA14Q0VDF9 509 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 MAP7Q14244 749 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 INPP5AQ14642 412 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 MBTPS1Q14703 1052 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 ACBD5Q5T8D3 534 aaPredicted RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 SH2D5Q6ZV89 423 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 EFL1Q7Z2Z2 1120 aaKnown RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 SIDT2Q8NBJ9 832 aaKnown RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 DNAJB14Q8TBM8 379 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 C19orf60Q96EN9 201 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 ANKRD27Q96NW4 1050 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 AK5Q9Y6K8 562 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 ALPIP09923 528 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 GM2AP17900 193 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 NFKBIAP25963 317 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 SERPINA4P29622 427 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 SQLEQ14534 574 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 ANGPTL8Q6UXH0 198 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms