RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 PCDHGA1Q9Y5H4 931 aa14.16□□□□□ -0.14
VEGFA-221ENST00000520265 PCDHA3Q9Y5H8 950 aa14.16□□□□□ -0.14
VEGFA-221ENST00000520265 CSNK1G3Q9Y6M4 447 aa14.16□□□□□ -0.14
VEGFA-221ENST00000520265 TMEM202A6NGA9 273 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 INPP4BO15327 924 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 PJA2O43164 708 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 MTSS1O43312 755 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 NRDCO43847 1150 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 FZD6O60353 706 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 GCATO75600 419 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 STK10O94804 968 aaKnown RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 ASMTLO95671 621 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 MT-CYBP00156 380 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 MMP2P08253 660 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 C1SP09871 688 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 MYCLP1P12525 358 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 ZNF30P17039 623 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 GM2AP17900 193 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 NFKB1P19838 968 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 RPIAP49247 311 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 KIAA1024LP59773 190 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 COPS2P61201 443 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 RPL26P61254 145 aaKnown RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 IHHQ14623 411 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 QPCTQ16769 361 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 TEX44Q53QW1 395 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 ALS2CLQ60I27 953 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 AADACL2Q6P093 401 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 EFL1Q7Z2Z2 1120 aaKnown RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 TAF8Q7Z7C8 310 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 GKN2Q86XP6 184 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 CDKL3Q8IVW4 592 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 PELI3Q8N2H9 469 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 IFI44Q8TCB0 444 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 OR1E3Q8WZA6 343 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 IMP4Q96G21 291 aaKnown RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 QKIQ96PU8 341 aaKnown RBP eCLIP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 LGR4Q9BXB1 951 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 GPR63Q9BZJ6 419 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 TSGA10Q9BZW7 698 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 SLC25A51Q9H1U9 297 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 C10orf88Q9H8K7 445 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 CARS2Q9HA77 564 aaKnown RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 FGF22Q9HCT0 170 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 PKD2L2Q9NZM6 624 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 GUCA1BQ9UMX6 200 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 RPL26L1Q9UNX3 145 aaKnown RBP14.15□□□□□ -0.14
VEGFA-221ENST00000520265 SHOC2Q9UQ13 582 aa14.15□□□□□ -0.14
VEGFA-221ENST00000520265 GOLGA6L9A6NEM1 432 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 HACD1B0YJ81 288 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 B4DGG1 531 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 APOC4-APOC2K7ER74 178 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 TJP3O95049 919 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 APOC2P02655 101 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 ACP1P24666 158 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 GNPDA1P46926 289 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 STC1P52823 247 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 EIF3EP60228 445 aaKnown RBP14.14□□□□□ -0.15
VEGFA-221ENST00000520265 CDK3Q00526 305 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 OTUD4Q01804 1114 aaKnown RBP14.14□□□□□ -0.15
VEGFA-221ENST00000520265 CDK18Q07002 472 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 BIRC2Q13490 618 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 TAZQ16635 292 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 DARS2Q6PI48 645 aaKnown RBP14.14□□□□□ -0.15
VEGFA-221ENST00000520265 BBS12Q6ZW61 710 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 MARK2Q7KZI7 788 aaKnown RBP14.14□□□□□ -0.15
VEGFA-221ENST00000520265 TMPRSS7Q7RTY8 843 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 LYSMD3Q7Z3D4 306 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 TRIM74Q86UV6 250 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 SLC25A41Q8N5S1 370 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 CCDC112Q8NEF3 446 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 IPMKQ8NFU5 416 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 MAPK15Q8TD08 544 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 HTR3CQ8WXA8 447 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 SCAMP4Q969E2 229 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 RIOK2Q9BVS4 552 aaKnown RBP14.14□□□□□ -0.15
VEGFA-221ENST00000520265 FSD1LQ9BXM9 530 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 CLPBQ9H078 707 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 ABCG8Q9H221 673 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 NCKIPSDQ9NZQ3 722 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 GPR34Q9UPC5 381 aa14.14□□□□□ -0.15
VEGFA-221ENST00000520265 PRSS38A1L453 326 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 ANKRD66B4E2M5 251 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 LMO7DNF2Z398 122 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 YY2O15391 372 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 KRT86O43790 486 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 PRLP01236 227 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 CDK4P11802 303 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 CKMT1AP12532 417 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 RBL1P28749 1068 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 PPM1FP49593 454 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-221ENST00000520265 PTSQ03393 145 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 ILKQ13418 452 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 NOMO1Q15155 1222 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 C6orf132Q5T0Z8 1188 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 KCTD16Q68DU8 428 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 GUSBP11Q6P575 273 aa14.13□□□□□ -0.15
VEGFA-221ENST00000520265 CCNI2Q6ZMN8 369 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-221ENST00000520265 LRRC57Q8N9N7 239 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms