RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 TCEA2Q15560 299 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 QPCTQ16769 361 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 TEX44Q53QW1 395 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 USP45Q70EL2 814 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 EFL1Q7Z2Z2 1120 aaKnown RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 GKN2Q86XP6 184 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 NRROSQ86YC3 692 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 RFX6Q8HWS3 928 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 TMTC1Q8IUR5 882 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 SFTPA2Q8IWL1 248 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 RCOR2Q8IZ40 523 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 NDUFAF2Q8N183 169 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 GPR156Q8NFN8 814 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 ATL2Q8NHH9 583 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 CCL4L1Q8NHW4 92 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 PTCD2Q8WV60 388 aaKnown RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 SCG3Q8WXD2 468 aaKnown RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 SCAMP4Q969E2 229 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 ITFG2Q969R8 447 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 TADA1Q96BN2 335 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 NUS1Q96E22 293 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 AGAP2Q99490 1192 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 TDRD1Q9BXT4 1180 aaKnown RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 ABCG4Q9H172 646 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 PCDH9Q9HC56 1237 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 CYP4F12Q9HCS2 524 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 SPATS2LQ9NUQ6 558 aaKnown RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 NCKIPSDQ9NZQ3 722 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 GPR34Q9UPC5 381 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 RAXQ9Y2V3 346 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 REXO2Q9Y3B8 237 aaKnown RBP9.33□□□□□ -0.92
HDAC3-215ENST00000519474 PCDHB1Q9Y5F3 818 aa9.33□□□□□ -0.92
HDAC3-215ENST00000519474 SPEGQ15772 3267 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 URB1O60287 2271 aaKnown RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 PRSS38A1L453 326 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 SOWAHDA6NJG2 315 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 SPOPO43791 374 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 NOBOXO60393 691 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 CST8O60676 142 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 NDUFA10O95299 355 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 SOD1P00441 154 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 KRT1P04264 644 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 NEFHP12036 1026 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 ZNF30P17039 623 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 KELP23276 732 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 NFKBIAP25963 317 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 TEAD1P28347 426 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 CYLC1P35663 651 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 CD86P42081 329 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 NR2C2P49116 596 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 RPIAP49247 311 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 STC1P52823 247 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 EPHB1P54762 984 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 RPL26P61254 145 aaKnown RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 DYNLT1P63172 113 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 CDK3Q00526 305 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 PDK1Q15118 436 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 SPA17Q15506 151 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 KAZNQ674X7 775 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 LRRC66Q68CR7 880 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 C19orf48Q6RUI8 117 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 RAD9BQ6WBX8 426 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 SPOCD1Q6ZMY3 1216 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 KDELC2Q7Z4H8 507 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 TAF8Q7Z7C8 310 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 NT5DC3Q86UY8 548 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 HEATR4Q86WZ0 1026 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 FAM46DQ8NEK8 389 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 MAPK15Q8TD08 544 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 GPBAR1Q8TDU6 330 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 HNRNPLLQ8WVV9 542 aaKnown RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 GLMNQ92990 594 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 EID2BQ96D98 161 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 IMP4Q96G21 291 aaKnown RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 PDXPQ96GD0 296 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 SCARF2Q96GP6 870 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 AGAP3Q96P47 875 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 TRIB3Q96RU7 358 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 LYSMD1Q96S90 227 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 MLPHQ9BV36 600 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 CEP41Q9BYV8 373 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 FRMD8Q9BZ67 464 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 LACRTQ9GZZ8 138 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 BRD8Q9H0E9 1235 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 PHPT1Q9NRX4 125 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 CD84Q9UIB8 345 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 MOSPD1Q9UJG1 213 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 RALYQ9UKM9 306 aaKnown RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 CNOT6Q9ULM6 557 aaKnown RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 RPL26L1Q9UNX3 145 aaKnown RBP9.32□□□□□ -0.92
HDAC3-215ENST00000519474 DOLKQ9UPQ8 538 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 TMEM98Q9Y2Y6 226 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 GPSM3Q9Y4H4 160 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 ST14Q9Y5Y6 855 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 AK5Q9Y6K8 562 aa9.32□□□□□ -0.92
HDAC3-215ENST00000519474 RP1P56715 2156 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 A0A1W2PNU3 283 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms