RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 HNF4AP41235 474 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 CDH8P55286 799 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 BACE1P56817 501 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 UBXN1Q04323 297 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 STIM1Q13586 685 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 OASLQ15646 514 aaKnown RBP7.36□□□□□ -1.23
CLK4-202ENST00000519132 INSCQ1MX18 579 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 CFAP157Q5JU67 520 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 NLRP9Q7RTR0 991 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 FAM160B2Q86V87 743 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 ADGRF4Q8IZF3 695 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 CCDC12Q8WUD4 166 aaPredicted RBP7.36□□□□□ -1.23
CLK4-202ENST00000519132 ATP2A3Q93084 1043 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 SMARCE1Q969G3 411 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 PGAP3Q96FM1 320 aaPredicted RBP7.36□□□□□ -1.23
CLK4-202ENST00000519132 FER1L6-AS2Q96M78 137 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 CGREF1Q99674 301 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 TUBA1CQ9BQE3 449 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 SEC63Q9UGP8 760 aaKnown RBP7.36□□□□□ -1.23
CLK4-202ENST00000519132 AQP7P3A6NL99 342 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 ZBTB5O15062 677 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 SLU7O95391 586 aaKnown RBP7.36□□□□□ -1.23
CLK4-202ENST00000519132 GGPS1O95749 300 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 IGLV1-40P01703 118 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 KRT14P02533 472 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 KRT1P04264 644 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 PRKAR1BP31321 381 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 STAT2P52630 851 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 VGLL4Q14135 290 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 NRN1LQ496H8 165 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 SETMARQ53H47 684 aaPredicted RBP7.36□□□□□ -1.23
CLK4-202ENST00000519132 NEPROQ6NW34 567 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 KDELC1Q6UW63 502 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 ANGPTL8Q6UXH0 198 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 ISLR2Q6UXK2 745 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 PPP1R21Q6ZMI0 780 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 NUP54Q7Z3B4 507 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 LUZP1Q86V48 1076 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 SUN3Q8TAQ9 357 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 CHURC1Q8WUH1 139 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 KAT2BQ92831 832 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 INTS12Q96CB8 462 aaKnown RBP7.36□□□□□ -1.23
CLK4-202ENST00000519132 SPATA25Q9BR10 227 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 CTNNAL1Q9UBT7 734 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 MTRF1LQ9UGC7 380 aaKnown RBP7.36□□□□□ -1.23
CLK4-202ENST00000519132 VAV3Q9UKW4 847 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 PADI1Q9ULC6 663 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 GRID1Q9ULK0 1009 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 CAPN7Q9Y6W3 813 aa7.36□□□□□ -1.23
CLK4-202ENST00000519132 COL11A1P12107 1806 aaPredicted RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 YKT6O15498 198 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 SPRY1O43609 319 aaPredicted RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 TADA2AO75478 443 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 CYP2C8P10632 490 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 VIPR1P32241 457 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 PPATQ06203 517 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 KIAA1755Q5JYT7 1200 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 ERMARDQ5T6L9 678 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 HIST2H2BCQ6DN03 193 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 HIST2H2BDQ6DRA6 164 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 REXO5Q96IC2 774 aaKnown RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 PIGSQ96S52 555 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 ZSWIM1Q9BR11 485 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 ZMYND12Q9H0C1 365 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 VPS37BQ9H9H4 285 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 ATAD3AQ9NVI7 634 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 RLIMQ9NVW2 624 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 HSPB7Q9UBY9 170 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 VPS4AQ9UN37 437 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 R3HDM2Q9Y2K5 976 aaKnown RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 ELP1O95163 1332 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 SYNJ2BP-COX16A0A087WUM0 186 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 CD3EAPO15446 510 aaKnown RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 TSPAN3O60637 253 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 ZNF3P17036 446 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 EPHB3P54753 998 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 KIF5AQ12840 1032 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 MAJINQ3KP22 176 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 CEP78Q5JTW2 689 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 INO80CQ6PI98 192 aaPredicted RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 SYT12Q8IV01 421 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 IL17RCQ8NAC3 791 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 TMEM209Q96SK2 561 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 HNRNPABQ99729 332 aaKnown RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 PPP1R14DQ9NXH3 145 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 VPS54Q9P1Q0 977 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 ZNF624Q9P2J8 865 aaPredicted RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 NDRG4Q9ULP0 352 aaKnown RBP7.35□□□□□ -1.23
CLK4-202ENST00000519132 SATB2Q9UPW6 733 aa7.35□□□□□ -1.23
CLK4-202ENST00000519132 HTR3EA5X5Y0 456 aa7.34□□□□□ -1.23
CLK4-202ENST00000519132 CTDSP2O14595 271 aa7.34□□□□□ -1.23
CLK4-202ENST00000519132 TRIM24O15164 1050 aa7.34□□□□□ -1.23
CLK4-202ENST00000519132 HDAC3O15379 428 aa7.34□□□□□ -1.23
CLK4-202ENST00000519132 EXTL3O43909 919 aa7.34□□□□□ -1.23
CLK4-202ENST00000519132 TSPAN9O75954 239 aa7.34□□□□□ -1.23
CLK4-202ENST00000519132 NPPAP01160 153 aa7.34□□□□□ -1.23
CLK4-202ENST00000519132 PENKP01210 267 aaPredicted RBP7.34□□□□□ -1.23
CLK4-202ENST00000519132 ATP5F1P24539 256 aaPredicted RBP7.34□□□□□ -1.23
CLK4-202ENST00000519132 UQCRC1P31930 480 aa7.34□□□□□ -1.23
CLK4-202ENST00000519132 KRT2P35908 639 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms