RNA–Protein interactions for RNA: ENST00000519057.5

COPS5-208, Transcript of COP9 signalosome subunit 5, human

TSL 4

Gene COPS5, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS5-208	ENST00000519057	MYOD1	P15172	320 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	CORO1A	P31146	461 aa	Known RBP	4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	USP8	P40818	1118 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	METAP2	P50579	478 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	CDH15	P55291	814 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	OS9	Q13438	667 aa	Predicted RBP	4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	NFIL3	Q16649	462 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	STXBP5	Q5T5C0	1151 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	LCTL	Q6UWM7	567 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	KMT5C	Q86Y97	462 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	ZCCHC9	Q8N567	271 aa	Known RBP	4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	SLC24A4	Q8NFF2	622 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	DMBX1	Q8NFW5	382 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	HUS1B	Q8NHY5	278 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	CDCA5	Q96FF9	252 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	PPP1R3E	Q9H7J1	279 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	BPIFA1	Q9NP55	256 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	RIC8A	Q9NPQ8	531 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	HCN3	Q9P1Z3	774 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	POU2F3	Q9UKI9	436 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	AMDHD2	Q9Y303	409 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	FAM96B	Q9Y3D0	163 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	COMMD10	Q9Y6G5	202 aa		4.26	□□□□□ -1.73
COPS5-208	ENST00000519057	CLSPN	Q9HAW4	1339 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	GAGE10	A6NGK3	116 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	LILRA5	A6NI73	299 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	LDLR	P01130	860 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	SERPINB2	P05120	415 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	DDX5	P17844	614 aa	Known RBP	4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	PSMC2	P35998	433 aa	Known RBP	4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	IL15	P40933	162 aa	Predicted RBP	4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	FMO5	P49326	533 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	ATP12A	P54707	1039 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	FCN2	Q15485	313 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	GRAMD1B	Q3KR37	738 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	SLC45A4	Q5BKX6	768 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	IRAK1BP1	Q5VVH5	260 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	PLEKHA7	Q6IQ23	1121 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	TRNP1	Q6NT89	227 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	CPLX2	Q6PUV4	134 aa	Known RBP	4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	SLC22A25	Q6T423	547 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	SPATA6L	Q8N4H0	392 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	WDSUB1	Q8N9V3	476 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	PCYT2	Q99447	389 aa		4.25	□□□□□ -1.73
COPS5-208	ENST00000519057	GUCY1B2	O75343	617 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	FTCD	O95954	541 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	PGM1	P36871	562 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	PPP2R5B	Q15173	497 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	KCTD18	Q6PI47	426 aa	Predicted RBP	4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	QSOX2	Q6ZRP7	698 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	LRRC8D	Q7L1W4	858 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	RNF113B	Q8IZP6	322 aa	Known RBP	4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	ZBTB10	Q96DT7	871 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	CMKLR1	Q99788	373 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	SH3GL2	Q99962	352 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	FAM110A	Q9BQ89	295 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	GFRA4	Q9GZZ7	299 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	GPR108	Q9NPR9	543 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	HINT3	Q9NQE9	182 aa	Known RBP	4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	HCFC1R1	Q9NWW0	138 aa		4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	CNOT7	Q9UIV1	285 aa	Known RBP	4.24	□□□□□ -1.73
COPS5-208	ENST00000519057	LDLRAD4	O15165	306 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	RRM1	P23921	792 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	BDKRB2	P30411	391 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	VEGFC	P49767	419 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	PPFIA1	Q13136	1202 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	BIRC2	Q13490	618 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	C14orf177	Q52M58	125 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	METTL2B	Q6P1Q9	378 aa	Known RBP	4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	ASB18	Q6ZVZ8	466 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	LRRTM4	Q86VH4	590 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	PABPC5	Q96DU9	382 aa	Known RBP	4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	METTL2A	Q96IZ6	378 aa	Known RBP	4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	SLC41A2	Q96JW4	573 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	ZNF583	Q96ND8	569 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	LRRC1	Q9BTT6	524 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	OR2W1	Q9Y3N9	320 aa		4.23	□□□□□ -1.73
COPS5-208	ENST00000519057	KRTAP9-6	A8MVA2	160 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	HAL	P42357	657 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	NR0B1	P51843	470 aa	Known RBP	4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	UFM1	P61960	85 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	GLIPR1L2	Q4G1C9	344 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	GPATCH4	Q5T3I0	446 aa	Known RBP	4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	ZNF280D	Q6N043	979 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	ZNF852	Q6ZMS4	543 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	METTL27	Q8N6F8	245 aa	Predicted RBP	4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	KLHDC9	Q8NEP7	349 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	FUZ	Q9BT04	418 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	RBM4	Q9BWF3	364 aa	Known RBP	4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	GPR63	Q9BZJ6	419 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	DDX43	Q9NXZ2	648 aa	Known RBP	4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	DLGAP4	Q9Y2H0	992 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	SCIN	Q9Y6U3	715 aa		4.22	□□□□□ -1.73
COPS5-208	ENST00000519057	TOP2A	P11388	1531 aa	Known RBP	4.21	□□□□□ -1.73
COPS5-208	ENST00000519057	NOTCH3	Q9UM47	2321 aa		4.21	□□□□□ -1.74
COPS5-208	ENST00000519057	CTAGE9	A4FU28	777 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms