RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 PLD1Q13393 1074 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 TOP3AQ13472 1001 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 GPM6BQ13491 265 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 SSPNQ14714 243 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZMYND11Q15326 602 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 CYP2A13Q16696 494 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 HIST2H2ACQ16777 129 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 FAM214AQ32MH5 1076 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 PCGF3Q3KNV8 242 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 FASTKD1Q53R41 847 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 HERC4Q5GLZ8 1057 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 CXorf66Q5JRM2 361 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 LRIF1Q5T3J3 769 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ATAD3BQ5T9A4 648 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 TXNDC8Q6A555 127 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 SFRP4Q6FHJ7 346 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 EFCAB12Q6NXP0 572 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 CASC4Q6P4E1 433 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 TRMT10BQ6PF06 316 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZC3H14Q6PJT7 736 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 NHLRC1Q6VVB1 395 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 TRIM72Q6ZMU5 477 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 WDR88Q6ZMY6 472 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZBTB49Q6ZSB9 765 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 MTSS1LQ765P7 747 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 SYVN1Q86TM6 617 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 CUZD1Q86UP6 607 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 AMZ2Q86W34 360 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 RASAL3Q86YV0 1011 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 TIGD4Q8IY51 512 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 CFAP206Q8IYR0 622 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZCCHC7Q8N3Z6 543 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ENDOVQ8N8Q3 282 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 OR52M1Q8NGK5 317 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZFP28Q8NHY6 868 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 RNASE8Q8TDE3 154 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 LRRC8CQ8TDW0 803 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 HEXDCQ8WVB3 486 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 MOAP1Q96BY2 351 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 NXNL1Q96CM4 212 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 CNOT6LQ96LI5 555 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 CEP295NLQ96MC4 621 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 TMEM68Q96MH6 324 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 EDEM2Q9BV94 578 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 SCNM1Q9BWG6 230 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 RTN4RQ9BZR6 473 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 CCSER1Q9C0I3 900 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 SAP30LQ9HAJ7 183 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 PCDH18Q9HCL0 1135 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 GPN1Q9HCN4 374 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 PAK6Q9NQU5 681 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 PRMT8Q9NR22 394 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 PRMT7Q9NVM4 692 aaPredicted RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 FAM118AQ9NWS6 357 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 RAI14Q9P0K7 980 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 NXF1Q9UBU9 619 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 BAIAP2L1Q9UHR4 511 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ATP6V1HQ9UI12 483 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 HACL1Q9UJ83 578 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 TRMT6Q9UJA5 497 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 RCOR1Q9UKL0 485 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 VAV3Q9UKW4 847 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 RAXQ9Y2V3 346 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 FAM96BQ9Y3D0 163 aa3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.98□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZNF804BA4D1E1 1349 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TRBV2A0A0J9YWF9 115 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 C2orf92A0A1B0GVN3 265 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 A0A1B0GWJ7 208 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 XKRY2A2RUG3 117 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ARHGAP42A6NI28 874 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ZAR1LA6NP61 321 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 YDJCA8MPS7 323 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 C17orf100A8MU93 164 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 KIAA1324LA8MWY0 1029 aaPredicted RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 MAGEB17A8MXT2 336 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 DSCR3O14972 297 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TO15178 435 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 TTI1O43156 1089 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 STC2O76061 302 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ADAP00813 363 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 IL1AP01583 271 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 HLA-DOAP06340 250 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SBK2P0C263 348 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 CYP2C8P10632 490 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SLC2A4P14672 509 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 AZGP1P25311 298 aaKnown RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 DNAJB1P25685 340 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 KLRC2P26717 231 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 STIP1P31948 543 aaKnown RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 WNT5AP41221 380 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ETV4P43268 484 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 GATA4P43694 442 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 GABRB2P47870 512 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 SERPINH1P50454 418 aaKnown RBP3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ETV1P50549 477 aa3.97□□□□□ -1.77
RNU4-60P-201ENST00000517239 ERVFRD-1P60508 538 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms