RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 KLHL17Q6TDP4 642 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 NKAPQ8N5F7 415 aaKnown RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PDZD7Q9H5P4 517 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ADPRHL2Q9NX46 363 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 RCOR3Q9P2K3 495 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 EPN2O95208 641 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 HOXB8P17481 243 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CPT1AP50416 773 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ZNF135P52742 658 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 BOP1Q14137 746 aaKnown RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 DPYSL2Q16555 572 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SOWAHAQ2M3V2 549 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CTXN3Q4LDR2 81 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 GATA6Q92908 595 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 MED8Q96G25 268 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 OR52E6Q96RD3 313 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SYT11Q9BT88 431 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 HDHD2Q9H0R4 259 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 UBAP1Q9NZ09 502 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 GPIP06744 558 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ZNF7P17097 686 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PBLDP30039 288 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SLC1A2P43004 574 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 GJA8P48165 433 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 RAB14P61106 215 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SLC39A12Q504Y0 691 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SDHAF4Q5VUM1 108 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ZNF57Q68EA5 555 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SYT12Q8IV01 421 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 TRIM63Q969Q1 353 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 LINGO1Q96FE5 620 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 FBXL20Q96IG2 436 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PAWRQ96IZ0 340 aaKnown RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 NODALQ96S42 347 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 FEM1AQ9BSK4 669 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ABCC13Q9NSE7 274 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 C4AP0C0L4 1744 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 C4BP0C0L5 1744 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 UBXN8O00124 270 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 DLX3O60479 287 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ULK1O75385 1050 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 BCAS2O75934 225 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 LRIG2O94898 1065 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ANGPTL1O95841 491 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ALDOAP04075 364 aaKnown RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ADORA2AP29274 412 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 GRM5P41594 1212 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CHRNA4P43681 627 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SCNN1GP51170 649 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ADAM17P78536 824 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PPP1R8Q12972 351 aaKnown RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 MADCAM1Q13477 382 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SLC10A6Q3KNW5 377 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CHST15Q7LFX5 561 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 RIOX2Q8IUF8 465 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 LRRC52Q8N7C0 313 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ZBTB8BQ8NAP8 495 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 MYLPFQ96A32 169 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 GPR20Q99678 358 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 GBA2Q9HCG7 927 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 FZD10Q9ULW2 581 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PDE10AQ9Y233 779 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ROBO1Q9Y6N7 1651 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 E7ESA3 106 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 SCAMP3O14828 347 aaKnown RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 BCKDKO14874 412 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 TP73O15350 636 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PAGE1O75459 146 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CCNKO75909 580 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 COX7A2P14406 83 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 HDCP19113 662 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CPSF6Q16630 551 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CMPK2Q5EBM0 449 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ZCCHC8Q6NZY4 707 aaKnown RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 FAM35AQ86V20 835 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PQLC3Q8N755 202 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 OR4L1Q8NH43 312 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 TBATAQ96M53 351 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ZBTB26Q9HCK0 441 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ARL15Q9NXU5 204 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 MYH11P35749 1972 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PIPSLA2A3N6 862 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 PSMD11O00231 422 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 NPHS1O60500 1241 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 MTPNP58546 118 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 ECT2LQ008S8 904 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 PRKCQQ04759 706 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 DENND5AQ6IQ26 1287 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 MCOLN3Q8TDD5 553 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 FTHL17Q9BXU8 183 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CPA4Q9UI42 421 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 TCAF1Q9Y4C2 921 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 CENPXA8MT69 81 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 ENPEPQ07075 957 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 IKBKEQ14164 716 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 PLEKHM3Q6ZWE6 761 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 AADATQ8N5Z0 425 aa7.74□□□□□ -1.17
CLCN3-209ENST00000513761 C2orf69Q8N8R5 385 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms