RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 SAP25Q8TEE9 199 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 SCFD1Q8WVM8 642 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 PRCCQ92733 491 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 SIPA1Q96FS4 1042 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF48Q96MX3 618 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 TIPINQ9BVW5 301 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ASB7Q9H672 318 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ZMAT4Q9H898 229 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ERVMER34-1Q9H9K5 563 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 POLR1BQ9H9Y6 1135 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 TM9SF3Q9HD45 589 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 CASS4Q9NQ75 786 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 SPHK2Q9NRA0 654 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 THSD1Q9NS62 852 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ASB6Q9NWX5 421 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 H2AFY2Q9P0M6 372 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF580Q9UK33 172 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 NAP1L2Q9ULW6 460 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 MAN2B2Q9Y2E5 1009 aa3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.84□□□□□ -1.79
PDLIM5-218ENST00000513341 TLN1Q9Y490 2541 aaKnown RBP3.84□□□□□ -1.8
PDLIM5-218ENST00000513341 RELNP78509 3460 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ITPR3Q14573 2671 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 A0A087WWV3 80 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ZNF840PA6NDX5 716 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 LACTBL1A8MY62 500 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 KCNJ18B7U540 433 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 H0YCG3 227 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 CPLX1O14810 134 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 TP73O15350 636 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 TIMM44O43615 452 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 SYNCRIPO60506 623 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 TSPAN3O60637 253 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 GASTP01350 101 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 IGHDP01880 384 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ACADMP11310 421 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 CYP2F1P24903 491 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 RBMS1P29558 406 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 CDC25AP30304 524 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ABCD1P33897 745 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 PNPLA4P41247 253 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 LHX1P48742 406 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ARRB1P49407 418 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 HARS2P49590 506 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 PEX3P56589 373 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 NOP14P78316 857 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 TMPRSS15P98073 1019 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 MEF2AQ02078 507 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 TLE1Q04724 770 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 DNAJC3Q13217 504 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 PDIA5Q14554 519 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 MAPRE1Q15691 268 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 SNX30Q5VWJ9 437 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 FAM171BQ6P995 826 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 KIAA1324Q6UXG2 1013 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 C4orf50Q6ZRC1 276 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 PIK3AP1Q6ZUJ8 805 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 DENND5BQ6ZUT9 1274 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 SPATA2LQ8IUW3 424 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 SFTPA1Q8IWL2 248 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 NSUN7Q8NE18 718 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 STKLD1Q8NE28 680 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 UCMAQ8WVF2 138 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ZNF274Q96GC6 653 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ZBTB45Q96K62 511 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 TCEANC2Q96MN5 208 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 SLC46A1Q96NT5 459 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ACOX2Q99424 681 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 TTLL2Q9BWV7 592 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ACE2Q9BYF1 805 aaPredicted RBP3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 POFUT1Q9H488 388 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 SGK2Q9HBY8 427 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 ZDHHC4Q9NPG8 344 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 KCTD5Q9NXV2 234 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 CFAP97Q9P2B7 532 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 SLC27A6Q9Y2P4 619 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 C2CD2Q9Y426 696 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 CPQQ9Y646 472 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 TCHHQ07283 1943 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 C2CD3Q4AC94 2353 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 FBN2P35556 2912 aa3.83□□□□□ -1.8
PDLIM5-218ENST00000513341 SPTBN1Q01082 2364 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CACNA1DQ01668 2161 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 SCN1AP35498 2009 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CCDC151A5D8V7 595 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 BTBD18B2RXH4 712 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 WASH3PC4AMC7 463 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 PRRT4C9JH25 899 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 OGTO15294 1046 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 KDM1AO60341 852 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CACNG3O60359 315 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 MAGEC1O60732 1142 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 HUS1O60921 280 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 MED24O75448 989 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 NTN1O95631 604 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 OAS1P00973 400 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 GP1BAP07359 652 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 LTA4HP09960 611 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 FAM163BP0C2L3 166 aa3.82□□□□□ -1.8
PDLIM5-218ENST00000513341 CISD3P0C7P0 127 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms