RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 AMZ2Q86W34 360 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CFAP206Q8IYR0 622 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 PTGR2Q8N8N7 351 aaPredicted RBP4.25□□□□□ -1.73
VCAN-209ENST00000513016 FAM46DQ8NEK8 389 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 NACC2Q96BF6 587 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 LINGO1Q96FE5 620 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 EXOC2Q96KP1 924 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 ZNF354BQ96LW1 612 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 APOL4Q9BPW4 351 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 BDH2Q9BUT1 245 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 PALMDQ9NP74 551 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 OSGEPQ9NPF4 335 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 TCF7L2Q9NQB0 619 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 THAP1Q9NVV9 213 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CDH7Q9ULB5 785 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CHKBQ9Y259 395 aa4.25□□□□□ -1.73
VCAN-209ENST00000513016 CCNE2O96020 404 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CRATP43155 626 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ITGA1P56199 1179 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ZNF155Q12901 538 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 PTGES3Q15185 160 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 KLHL26Q53HC5 615 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 RPTNQ6XPR3 784 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 APTXQ7Z2E3 356 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 GRASPQ7Z6J2 395 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 RTL3Q8N8U3 475 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 RAB7BQ96AH8 199 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 C8orf48Q96LL4 319 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ZMAT2Q96NC0 199 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 WRAP53Q9BUR4 548 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 SLC25A51Q9H1U9 297 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ABCB8Q9NUT2 735 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ZDHHC9Q9Y397 364 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PLIN4Q96Q06 1357 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 GRIN2DO15399 1336 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MROH2AA6NES4 1674 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 FAM234BA2RU67 622 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 OR5K4A6NMS3 321 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ATG7O95352 703 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CCDC166P0CW27 439 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 ATP6V1B2P21281 511 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 HNF4AP41235 474 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MAGEA11P43364 429 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MTM1Q13496 603 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 KRR1Q13601 381 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 LARS2Q15031 903 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 SF3B4Q15427 424 aaKnown RBP eCLIP4.24□□□□□ -1.73
VCAN-209ENST00000513016 HECTD2Q5U5R9 776 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 BRAT1Q6PJG6 821 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SIDT2Q8NBJ9 832 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 ITCHQ96J02 903 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MYLK2Q9H1R3 596 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CDC42EP4Q9H3Q1 356 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 AGO3Q9H9G7 860 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 GOLGA2P5Q9HBQ8 144 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 FBXO6Q9NRD1 293 aaPredicted RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 DDX18Q9NVP1 670 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 RAPGEFL1Q9UHV5 662 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PCDHGC3Q9UN70 934 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PADI2Q9Y2J8 665 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 N6AMT1Q9Y5N5 214 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 INSL5Q9Y5Q6 135 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 A6NCN8 305 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TIMP1P01033 207 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 GIMD1P0DJR0 217 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 GOT1P17174 413 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 FASP25445 335 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SERPINB5P36952 375 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 GNPDA1P46926 289 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 DAOAP59103 153 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 RAB10P61026 200 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 AUHQ13825 339 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 HNRNPDQ14103 355 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 TSNQ15631 228 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 AMZ1Q400G9 498 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 FAM153CQ494X1 144 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TYW3Q6IPR3 259 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 MED27Q6P2C8 311 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TMEM220Q6QAJ8 160 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 RTL10Q7L3V2 364 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 NATD1Q8N6N6 113 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 RASGEF1AQ8N9B8 481 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 PIGKQ92643 395 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 HDAC10Q969S8 669 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 MTFMTQ96DP5 389 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 THAP11Q96EK4 314 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 APOPT1Q96IL0 206 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CLCC1Q96S66 551 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 DUSP9Q99956 384 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 MRPL57Q9BQC6 102 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 TRMOQ9BU70 441 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CDADC1Q9BWV3 514 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 TMEM120AQ9BXJ8 343 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SLC4A5Q9BY07 1137 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 REEP1Q9H902 201 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 CARS2Q9HA77 564 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 SGK2Q9HBY8 427 aa4.24□□□□□ -1.73
VCAN-209ENST00000513016 SPATS2LQ9NUQ6 558 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 GEMIN8Q9NWZ8 242 aaKnown RBP4.24□□□□□ -1.73
VCAN-209ENST00000513016 FBXL12Q9NXK8 326 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms