RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 CNTN5O94779 1100 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 BAIAP3O94812 1187 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 HNRNPCP07910 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 BMP2P12643 396 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 ADAM17P78536 824 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 CREB5Q02930 508 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 MARC1Q5VT66 337 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 KLHDC8BQ8IXV7 354 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 ANKFN1Q8N957 763 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 STON2Q8WXE9 905 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 PSMG2Q969U7 264 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 HMCESQ96FZ2 354 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 UHRF1Q96T88 793 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 NOL6Q9H6R4 1146 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 CSNK1G1Q9HCP0 422 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 SEMA4BQ9NPR2 832 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 USP22Q9UPT9 525 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 FNDC3AQ9Y2H6 1198 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 A0A087WXM4 84 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 NCF1BA6NI72 391 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 NCF1CA8MVU1 366 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 FXYD1O00168 92 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 EI24O14681 340 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 TFPTP0C1Z6 253 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 NCF1P14598 390 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 SLC6A2P23975 617 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 ACADVLP49748 655 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 ZNF33AQ06730 810 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 MERTKQ12866 999 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 GPR107Q5VW38 600 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 MIER2Q8N344 545 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 MAGEE2Q8TD90 523 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 C12orf43Q96C57 262 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 TUBB1Q9H4B7 451 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 FAM50BQ9Y247 325 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 UBA6A0AVT1 1052 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 GIPC1O14908 333 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 AZIN1O14977 448 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 SLC5A3P53794 718 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 PLIN5Q00G26 463 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 INPP5AQ14642 412 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 OR4D1Q15615 310 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 ALFQ53S48 1182 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 TIGD7Q6NT04 549 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 DUS1LQ6P1R4 473 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 ZNF549Q6P9A3 640 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 AGMOQ6ZNB7 445 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 FAM43BQ6ZT52 329 aaPredicted RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 RTL3Q8N8U3 475 aaKnown RBP9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 CPA4Q9UI42 421 aa9.25□□□□□ -0.93
LIMCH1-215ENST00000512632 C17orf102A2RUQ5 167 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 SUPT3HO75486 399 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 CRCPO75575 148 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 PSMA4P25789 261 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 HERVK_113P63132 956 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ANKDD1AQ495B1 522 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 SCD5Q86SK9 330 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 OR13C4Q8NGS5 318 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 TMEM74Q96NL1 305 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ERVK-6Q9BXR3 956 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 POLR1BQ9H9Y6 1135 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 SLAMF8Q9P0V8 285 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ARL5AQ9Y689 179 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 FGF10O15520 208 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 HMBSP08397 361 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 RENBPP51606 427 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 MLLT6P55198 1093 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 NEDD8Q15843 81 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ZIK1Q3SY52 487 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 SIRPB2Q5JXA9 342 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 OTUD3Q5T2D3 398 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 C8orf82Q6P1X6 216 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 PLEKHH3Q7Z736 793 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ZNF467Q7Z7K2 595 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 CIR1Q86X95 450 aaPredicted RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 METTL23Q86XA0 190 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 HM13Q8TCT9 377 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ISOC1Q96CN7 298 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 LRRC58Q96CX6 371 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 TEX37Q96LM6 180 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 TRMOQ9BU70 441 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 NAA50Q9GZZ1 169 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 AGO3Q9H9G7 860 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 CXorf21Q9HAI6 301 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 SP110Q9HB58 689 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 MRM3Q9HC36 420 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ARMC1Q9NVT9 282 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 A0A1W2PQH9 124 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ARPC2O15144 300 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 TBX18O95935 607 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ITGB1P05556 798 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 CYP2C18P33260 490 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 NFYCQ13952 458 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 XKR5Q6UX68 686 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 BRI3BPQ8WY22 251 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 IRGQQ8WZA9 623 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 IMP4Q96G21 291 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ACOX2Q99424 681 aa9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 PAIP1Q9H074 479 aaKnown RBP9.24□□□□□ -0.93
LIMCH1-215ENST00000512632 ABCC13Q9NSE7 274 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms