RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SLC25A41Q8N5S1 370 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 RNF10Q8N5U6 811 aaKnown RBP13.55□□□□□ -0.24
SNF8-206ENST00000509989 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 CCL4L1Q8NHW4 92 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 CCDC110Q8TBZ0 833 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 LMX1AQ8TE12 382 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 CALR3Q96L12 384 aaKnown RBP13.55□□□□□ -0.24
SNF8-206ENST00000509989 SCNM1Q9BWG6 230 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 SUDS3Q9H7L9 328 aaPredicted RBP13.55□□□□□ -0.24
SNF8-206ENST00000509989 KLHL8Q9P2G9 620 aaPredicted RBP13.55□□□□□ -0.24
SNF8-206ENST00000509989 FTSJ1Q9UET6 329 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 PLEKHM1Q9Y4G2 1056 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 ST14Q9Y5Y6 855 aa13.55□□□□□ -0.24
SNF8-206ENST00000509989 ZNF106Q9H2Y7 1883 aaKnown RBP13.55□□□□□ -0.24
SNF8-206ENST00000509989 MAP1BP46821 2468 aaKnown RBP13.54□□□□□ -0.24
SNF8-206ENST00000509989 KIF26BQ2KJY2 2108 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 C1orf232A0A0U1RR37 186 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 A0A1W2PQ67 120 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 GOLGA6CA6NDK9 693 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 GOLGA6BA6NDN3 693 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 FADS2P1A8MWK0 482 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 ENC1O14682 589 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 KCNN4O15554 427 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 SLC4A1P02730 911 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 CCDC175P0C221 793 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 GOLGA6DP0CG33 693 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 TSHRP16473 764 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 CA5AP35218 305 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 WNT3AP56704 352 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 CDK18Q07002 472 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 XRCC4Q13426 336 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 ARHGEF7Q14155 803 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 PTPRCAPQ14761 206 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 PRRT3Q5FWE3 981 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 ZNF648Q5T619 568 aaPredicted RBP13.54□□□□□ -0.24
SNF8-206ENST00000509989 FAXCQ5TGI0 409 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 DARS2Q6PI48 645 aaKnown RBP13.54□□□□□ -0.24
SNF8-206ENST00000509989 DHRS13Q6UX07 377 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 RAB44Q7Z6P3 723 aaPredicted RBP13.54□□□□□ -0.24
SNF8-206ENST00000509989 HEATR4Q86WZ0 1026 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 DCP2Q8IU60 420 aaKnown RBP13.54□□□□□ -0.24
SNF8-206ENST00000509989 REXO1L1PQ8IX06 675 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 SYCE1Q8N0S2 351 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 OR4C6Q8NH72 309 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 LYSMD1Q96S90 227 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 APOL2Q9BQE5 337 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 RIOK2Q9BVS4 552 aaKnown RBP13.54□□□□□ -0.24
SNF8-206ENST00000509989 C1QTNF7Q9BXJ2 289 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 ARFGAP3Q9NP61 516 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 GOLGA6AQ9NYA3 693 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 APOBEC3BQ9UH17 382 aaKnown RBP13.54□□□□□ -0.24
SNF8-206ENST00000509989 EFR3BQ9Y2G0 817 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 TMEM98Q9Y2Y6 226 aa13.54□□□□□ -0.24
SNF8-206ENST00000509989 TPRP12270 2363 aaKnown RBP13.54□□□□□ -0.24
SNF8-206ENST00000509989 LOC285095A0A1B0GVY8 99 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 FAM149AA5PLN7 773 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 MIF4GDA9UHW6 222 aaKnown RBP13.53□□□□□ -0.24
SNF8-206ENST00000509989 HACD1B0YJ81 288 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 INPP4BO15327 924 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 AQP9O43315 295 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 TNFSF14O43557 240 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 BUD23O43709 281 aaKnown RBP13.53□□□□□ -0.24
SNF8-206ENST00000509989 KRT86O43790 486 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 AGTP01019 485 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 PSMB4P28070 264 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 ACADVLP49748 655 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 SRP54P61011 504 aaKnown RBP13.53□□□□□ -0.24
SNF8-206ENST00000509989 PPARDQ03181 441 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 SPARCL1Q14515 664 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 SIX1Q15475 284 aaPredicted RBP13.53□□□□□ -0.24
SNF8-206ENST00000509989 SIRPB2Q5JXA9 342 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 ANKRD20A2Q5SQ80 823 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 ANKRD20A1Q5TYW2 823 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 ANKRD20A3Q5VUR7 823 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 ALS2CLQ60I27 953 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 BZW1Q7L1Q6 419 aaKnown RBP13.53□□□□□ -0.24
SNF8-206ENST00000509989 UBL4BQ8N7F7 174 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 GPR26Q8NDV2 337 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 IPMKQ8NFU5 416 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 SLC35B2Q8TB61 432 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 FAM174AQ8TBP5 190 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 IFT43Q96FT9 208 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 APOLD1Q96LR9 279 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 WDR92Q96MX6 357 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 FCRL5Q96RD9 977 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
SNF8-206ENST00000509989 TLR10Q9BXR5 811 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 TEX101Q9BY14 249 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 BPIFA1Q9NP55 256 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 RSPH14Q9UHP6 348 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 DNPEPQ9ULA0 475 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 CNOT6Q9ULM6 557 aaKnown RBP13.53□□□□□ -0.24
SNF8-206ENST00000509989 ZNF711Q9Y462 761 aa13.53□□□□□ -0.24
SNF8-206ENST00000509989 OAS3Q9Y6K5 1087 aaKnown RBP13.53□□□□□ -0.24
SNF8-206ENST00000509989 PSMD11O00231 422 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 YY2O15391 372 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 YKT6O15498 198 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 USP12O75317 370 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 TJP3O95049 919 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 METTL18O95568 372 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms