RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 RPL13P26373 211 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 MRPL49Q13405 166 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 MGAT5BQ3V5L5 792 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 SLC9A4Q6AI14 798 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TRMT1LQ7Z2T5 733 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 MFSD6LQ8IWD5 586 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TMEM125Q96AQ2 219 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 ZNF668Q96K58 619 aaPredicted RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 FAM81BQ96LP2 452 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 GHITMQ9H3K2 345 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 UNKLQ9H9P5 680 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 CPSF3Q9UKF6 684 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 SLC13A4Q9UKG4 626 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 ITGA11Q9UKX5 1188 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 PIN4Q9Y237 131 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 OAS3Q9Y6K5 1087 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 FAM90A20PA6NIJ5 464 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 YEATS4O95619 227 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 ZNF883P0CG24 379 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TNNT1P13805 278 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 WARSP23381 471 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 KLRC2P26717 231 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CDC25CP30307 473 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 ACSL1P33121 698 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 NUDT1P36639 197 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CLCN2P51788 898 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 RBM20Q5T481 1227 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 SPARTQ8N0X7 666 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 FITM2Q8N6M3 262 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TMEM161BQ8NDZ6 487 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CXorf38Q8TB03 319 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 MYADMQ96S97 322 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 FIZ1Q96SL8 496 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CDK5RAP1Q96SZ6 601 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 ACBD6Q9BR61 282 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 ENKD1Q9H0I2 346 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TNMDQ9H2S6 317 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 NDRG4Q9ULP0 352 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 ZNF510Q9Y2H8 683 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 SLC27A6Q9Y2P4 619 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 RAD54BQ9Y620 910 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 VWA8A3KMH1 1905 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 PTPRJQ12913 1337 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 hCG_1807616A0A1W2PRN6 198 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 PTGESO14684 152 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 OGTO15294 1046 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TEX33O43247 280 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CHMP2AO43633 222 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TMCC2O75069 709 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 DDHD2O94830 711 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 SUN1O94901 812 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 ERLIN2O94905 339 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 EPN2O95208 641 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 FCARP24071 287 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 MARCKSP29966 332 aaPredicted RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 HOXD13P35453 343 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TNFRSF4P43489 277 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CCR3P51677 355 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 KCNMA1Q12791 1236 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 FZD5Q13467 585 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 ANGPT1Q15389 498 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 ME3Q16798 604 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CFAP221Q4G0U5 840 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 FAM171BQ6P995 826 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 LAYNQ6UX15 382 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 VSTM1Q6UX27 236 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 FAM217AQ8IXS0 508 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CACTINQ8WUQ7 758 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 LPPQ93052 612 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 PERPQ96FX8 193 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 TCEANC2Q96MN5 208 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 CLSTN3Q9BQT9 956 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 EPB41L4BQ9H329 900 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 STN1Q9H668 368 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 LARSQ9P2J5 1176 aaKnown RBP5.13□□□□□ -1.59
NEK1-204ENST00000509912 TMEM98Q9Y2Y6 226 aa5.13□□□□□ -1.59
NEK1-204ENST00000509912 NOTCH4Q99466 2003 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 GREB1Q4ZG55 1949 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 TDP2O95551 362 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 RPN1P04843 607 aaKnown RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 ATXN1P54253 815 aaKnown RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 GP2P55259 537 aaKnown RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 ASIC1P78348 528 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 ST3GAL1Q11201 340 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 PRPF4BQ13523 1007 aaKnown RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 ATF7IP2Q5U623 682 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 KRT79Q5XKE5 535 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 MTERF4Q7Z6M4 381 aaKnown RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 DNAJB7Q7Z6W7 309 aaPredicted RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 TMEM173Q86WV6 379 aaPredicted RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 DIS3L2Q8IYB7 885 aaKnown RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 SPEM1Q8N4L4 309 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 SLC44A3Q8N4M1 653 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 CPT1BQ92523 772 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 RSRC1Q96IZ7 334 aaKnown RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 RADILQ96JH8 1075 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 MMTAG2Q9BU76 263 aaKnown RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 ITPAQ9BY32 194 aa5.12□□□□□ -1.59
NEK1-204ENST00000509912 POLR3FQ9H1D9 316 aaPredicted RBP5.12□□□□□ -1.59
NEK1-204ENST00000509912 CHMP5Q9NZZ3 219 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms