RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OLFM2O95897 454 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 APOA4P06727 396 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 SERPINA6P08185 405 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 EPCAMP16422 314 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 GM2AP17900 193 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 FPGSQ05932 587 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 SLC5A9Q2M3M2 681 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 AGAP9Q5VTM2 703 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 LILRA6Q6PI73 481 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 NCEH1Q6PIU2 408 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 SDCCAG8Q86SQ7 713 aaPredicted RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 TMEM25Q86YD3 366 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 TEX9Q8N6V9 391 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 EFCAB3Q8N7B9 438 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 INPP5DQ92835 1189 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 MRPL57Q9BQC6 102 aaKnown RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 GPR63Q9BZJ6 419 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 INTS6Q9UL03 887 aaKnown RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 CHD5Q8TDI0 1954 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 CAPN14A8MX76 684 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 H3BMM5 538 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 ITGB6P18564 788 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 SERPINB5P36952 375 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 STC1P52823 247 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 RFTN1Q14699 578 aaPredicted RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 KLC3Q6P597 504 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 EID2BQ96D98 161 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 ALG14Q96F25 216 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 TACO1Q9BSH4 297 aaKnown RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 ADGRE3Q9BY15 652 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 DRC3Q9H069 523 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 LINC00597Q9H2U6 94 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 MID2Q9UJV3 735 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 KIAA1671Q9BY89 1806 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 NIPSNAP2O75323 286 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 SIX3O95343 332 aaPredicted RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 HSPA8P11142 646 aaKnown RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 SLC25A3Q00325 362 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 TIAL1Q01085 375 aaKnown RBP eCLIP14.87□□□□□ -0.03
PHF3-209ENST00000509330 DBN1Q16643 649 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 PTPRNQ16849 979 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 TMEM240Q5SV17 173 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 FAM151BQ6UXP7 276 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 CCDC149Q6ZUS6 474 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 SNX31Q8N9S9 440 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 KCNV2Q8TDN2 545 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 TSPAN17Q96FV3 270 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 SLC30A3Q99726 388 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 CCDC68Q9H2F9 335 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 NLE1Q9NVX2 485 aaPredicted RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 STOML2Q9UJZ1 356 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 MYO9BQ13459 2157 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 ANKRD12Q6UB98 2062 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 GSC2O15499 205 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 LPOP22079 712 aaPredicted RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 CDC25CP30307 473 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 RPL14P50914 215 aaKnown RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 TAF1AQ15573 450 aaPredicted RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 TSNAXIP1Q2TAA8 658 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 SEL1L3Q68CR1 1132 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 PAQR3Q6TCH7 311 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.87□□□□□ -0.03
PHF3-209ENST00000509330 SCG3Q8WXD2 468 aaKnown RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 ERLEC1Q96DZ1 483 aa14.87□□□□□ -0.03
PHF3-209ENST00000509330 C2orf49Q9BVC5 232 aaPredicted RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 DENND2DQ9H6A0 471 aaPredicted RBP14.87□□□□□ -0.03
PHF3-209ENST00000509330 ANKRD36A6QL64 1941 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 TMEM114B3SHH9 223 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 UBXN8O00124 270 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 PPP6CO00743 305 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 SUPT7LO94864 414 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 COL6A2P12110 1019 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 HLA-FP30511 346 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 FAM45BPQ6NSW5 357 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 DCAF4L2Q8NA75 395 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 FAM45AQ8TCE6 357 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 CATSPER2Q96P56 530 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 GPR21Q99679 349 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 EMILIN2Q9BXX0 1053 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 TCF7L2Q9NQB0 619 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 PACSIN3Q9UKS6 424 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 IKZF3Q9UKT9 509 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 RAP2CQ9Y3L5 183 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 PLXNA4Q9HCM2 1894 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 SPECC1L-ADORA2AF8WAN1 911 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 ATP5F1P24539 256 aaPredicted RBP14.86□□□□□ -0.03
PHF3-209ENST00000509330 CA5AP35218 305 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 HTRA4P83105 476 aaPredicted RBP14.86□□□□□ -0.03
PHF3-209ENST00000509330 ACVR1Q04771 509 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 DGKKQ5KSL6 1271 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 CLEC6AQ6EIG7 209 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 FAM109BQ6ICB4 259 aaPredicted RBP14.86□□□□□ -0.03
PHF3-209ENST00000509330 SIDT2Q8NBJ9 832 aaKnown RBP14.86□□□□□ -0.03
PHF3-209ENST00000509330 ESAMQ96AP7 390 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 MYO19Q96H55 970 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 FAM161BQ96MY7 647 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 THTPAQ9BU02 230 aa14.86□□□□□ -0.03
PHF3-209ENST00000509330 DNMT3BQ9UBC3 853 aaKnown RBP14.86□□□□□ -0.03
PHF3-209ENST00000509330 TAGLN3Q9UI15 199 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms