RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 OR13J1Q8NGT2 312 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.38□□□□□ -0.75
RFC1-211ENST00000509084 FAM131CQ96AQ9 280 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 CLDN23Q96B33 292 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 SGSM3Q96HU1 749 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 DNAJC1Q96KC8 554 aaKnown RBP10.38□□□□□ -0.75
RFC1-211ENST00000509084 ZNF778Q96MU6 729 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 FCRL3Q96P31 734 aaPredicted RBP10.38□□□□□ -0.75
RFC1-211ENST00000509084 PLEKHG4BQ96PX9 1271 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 MKRN2Q9H000 416 aaKnown RBP10.38□□□□□ -0.75
RFC1-211ENST00000509084 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 MFSD1Q9H3U5 465 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 PLAC1Q9HBJ0 212 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 PPANQ9NQ55 473 aaKnown RBP10.38□□□□□ -0.75
RFC1-211ENST00000509084 C20orf96Q9NUD7 363 aaPredicted RBP10.38□□□□□ -0.75
RFC1-211ENST00000509084 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 VPS18Q9P253 973 aa10.38□□□□□ -0.75
RFC1-211ENST00000509084 XIRP2A4UGR9 3374 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 A0A1W2PP55 124 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 TCRBV21S2A2A0A5A6 115 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CCDC78A2IDD5 438 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 NEMP1O14524 444 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 RASGRF2O14827 1237 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 AURKAO14965 403 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 OPA1O60313 960 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CDH16O75309 829 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 VAPBO95292 243 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CLDN7O95471 211 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 INHBAP08476 426 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 OGNP20774 298 aaKnown RBP10.37□□□□□ -0.75
RFC1-211ENST00000509084 LHCGRP22888 699 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CNTFP26441 200 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 ATP5DP30049 168 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 DRD3P35462 400 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 PPARGP37231 505 aaPredicted RBP10.37□□□□□ -0.75
RFC1-211ENST00000509084 SPAM1P38567 509 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 SERPINB9P50453 376 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 RALGDSQ12967 914 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 KBTBD12Q3ZCT8 623 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 PIP5KL1Q5T9C9 394 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 LGSNQ5TDP6 509 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 AGBL4Q5VU57 503 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 MRNIPQ6NTE8 343 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 TRMT10BQ6PF06 316 aaKnown RBP10.37□□□□□ -0.75
RFC1-211ENST00000509084 Q6ZS52 159 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 KIAA0408Q6ZU52 694 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 GALNT7Q86SF2 657 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CNTN4Q8IWV2 1026 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CTAGE3PQ8IX95 158 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 NRSN1Q8IZ57 195 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 SPEM1Q8N4L4 309 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 TSTD1Q8NFU3 115 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 OR6P1Q8NGX9 317 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 UHMK1Q8TAS1 419 aaKnown RBP10.37□□□□□ -0.75
RFC1-211ENST00000509084 DTX3LQ8TDB6 740 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CXorf40AQ8TE69 158 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 GANCQ8TET4 914 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 HDAC10Q969S8 669 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CDKN2AIPNLQ96HQ2 116 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 MRGPRX1Q96LB2 322 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 PAFAH2Q99487 392 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 TTC1Q99614 292 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 CPNE1Q99829 537 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 TRIM56Q9BRZ2 755 aaKnown RBP10.37□□□□□ -0.75
RFC1-211ENST00000509084 FOXQ1Q9C009 403 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 STMN4Q9H169 189 aaPredicted RBP10.37□□□□□ -0.75
RFC1-211ENST00000509084 ZNF106Q9H2Y7 1883 aaKnown RBP10.37□□□□□ -0.75
RFC1-211ENST00000509084 PREBQ9HCU5 417 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 FBXL12Q9NXK8 326 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 PSMC3IPQ9P2W1 217 aaPredicted RBP10.37□□□□□ -0.75
RFC1-211ENST00000509084 SLC2A6Q9UGQ3 507 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 ZNF180Q9UJW8 692 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 VPS9D1Q9Y2B5 631 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 FADS3Q9Y5Q0 445 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 NFS1Q9Y697 457 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 SLC30A1Q9Y6M5 507 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 EYSQ5T1H1 3165 aa10.37□□□□□ -0.75
RFC1-211ENST00000509084 GLYATL1P3A0A0U1RQE8 302 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 POC1B-GALNT4F8VUJ3 575 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 DCXO43602 365 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 RNASEH2AO75792 299 aaKnown RBP10.36□□□□□ -0.75
RFC1-211ENST00000509084 C1QAP02745 245 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 SHBGP04278 402 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 C1SP09871 688 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 MYZAPP0CAP1 466 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 NDUFV2P19404 249 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 ITGALP20701 1170 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 ARNTP27540 789 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 GP5P40197 560 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 MSH2P43246 934 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 ARCN1P48444 511 aaKnown RBP10.36□□□□□ -0.75
RFC1-211ENST00000509084 SPINT3P49223 89 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 METAP1P53582 386 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 CSE1LP55060 971 aaKnown RBP10.36□□□□□ -0.75
RFC1-211ENST00000509084 TMPRSS15P98073 1019 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 ZNF844Q08AG5 666 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 FZD5Q13467 585 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 CAMK2BQ13554 666 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 ITGA9Q13797 1035 aa10.36□□□□□ -0.75
RFC1-211ENST00000509084 KRT71Q3SY84 523 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms