RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 SMG7Q92540 1137 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 INPP5DQ92835 1189 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 ZKSCAN4Q969J2 545 aaPredicted RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 RPL36ALQ969Q0 106 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 POLDIP3Q9BY77 421 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 MRPL1Q9BYD6 325 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 PDE7BQ9NP56 450 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 LTB4R2Q9NPC1 389 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 MKKSQ9NPJ1 570 aaPredicted RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 GPR108Q9NPR9 543 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 HINT3Q9NQE9 182 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 DDX4Q9NQI0 724 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 SLC35C2Q9NQQ7 365 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 POT1Q9NUX5 634 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 TMEM51Q9NW97 253 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 CISD1Q9NZ45 108 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 MARCH4Q9P2E8 410 aaPredicted RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 SEC63Q9UGP8 760 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 EXO1Q9UQ84 846 aaKnown RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 CMAHPQ9Y471 501 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 STON1Q9Y6Q2 735 aa3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 COL3A1P02461 1466 aaPredicted RBP3.83□□□□□ -1.8
COL4A3BP-205ENST00000508692 ARHGEF17Q96PE2 2063 aaPredicted RBP3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 A0A1B0GVM2 712 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 DNAJC9-AS1A6NH13 148 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 LRRC72A6NJI9 287 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 SH2B2O14492 632 aaPredicted RBP3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 CTDSP2O14595 271 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 ERAL1O75616 437 aaKnown RBP3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 GJB3O75712 270 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 NAGAP17050 411 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 IL11P20809 199 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PON1P27169 355 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 SLC15A1P46059 708 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PMS2P54278 862 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 P2RX3P56373 397 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 TAS2R40P59535 323 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 GPR18Q14330 331 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 C2orf68Q2NKX9 166 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 CDONQ4KMG0 1287 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PPP6R3Q5H9R7 873 aaPredicted RBP3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PQLC2Q6ZP29 291 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 MTSS1LQ765P7 747 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 ZNF367Q7RTV3 350 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PIM3Q86V86 326 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 SPATA6LQ8N4H0 392 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 TMEM199Q8N511 208 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 SYT2Q8N9I0 419 aaPredicted RBP3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 OR14L1PQ8NHC6 308 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PRPF31Q8WWY3 499 aaKnown RBP3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 SLC25A28Q96A46 364 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 LRFN5Q96NI6 719 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 NUDCD1Q96RS6 583 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 ACOX2Q99424 681 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PCGF1Q9BSM1 259 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 SIL1Q9H173 461 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 NDST4Q9H3R1 872 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PLK3Q9H4B4 646 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 SLC28A3Q9HAS3 691 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 PSD3Q9NYI0 1048 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 OR6C3Q9NZP0 311 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 CFDP1Q9UEE9 299 aaPredicted RBP3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 FBXW11Q9UKB1 542 aa3.82□□□□□ -1.8
COL4A3BP-205ENST00000508692 ATXN2Q99700 1313 aaKnown RBP3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 RPS10-NUDT3A0A1W2PQS6 291 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 SOCS2O14508 198 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 IKBKBO14920 756 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 LDB2O43679 373 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 ZNF500O60304 480 aaPredicted RBP3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 DKC1O60832 514 aaKnown RBP eCLIP3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 MITFO75030 526 aaPredicted RBP3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 ENTPD3O75355 529 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 TPPPO94811 219 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 SOX30O94993 753 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 VNN2O95498 520 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 SELLP14151 372 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 MAOAP21397 527 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 UBA1P22314 1058 aaKnown RBP3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 NRIP1P48552 1158 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 HSD17B4P51659 736 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 PRPF4BQ13523 1007 aaKnown RBP3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 PCLAFQ15004 111 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 PRTGQ2VWP7 1150 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 FSCBQ5H9T9 825 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 RARS2Q5T160 578 aaKnown RBP3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 GARNL3Q5VVW2 1013 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 NUGGCQ68CJ6 796 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 ZNF280DQ6N043 979 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 SLC30A6Q6NXT4 461 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 CFAP77Q6ZQR2 320 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 Q6ZTK2 550 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 SHFQ7M4L6 423 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 TSPAN33Q86UF1 283 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 DNAAF5Q86Y56 855 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 ARID3BQ8IVW6 561 aaPredicted RBP3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 CCDC13Q8IYE1 715 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 POMGNT2Q8NAT1 580 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 AVL9Q8NBF6 648 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 GPT2Q8TD30 523 aa3.81□□□□□ -1.8
COL4A3BP-205ENST00000508692 NSMCE1Q8WV22 266 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms