RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CLK4Q9HAZ1 481 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 PARVGQ9HBI0 331 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 MOV10Q9HCE1 1003 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 TCF7L1Q9HCS4 588 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 TRPC7Q9HCX4 862 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 NLRC4Q9NPP4 1024 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 PFDN4Q9NQP4 134 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 DIABLOQ9NR28 239 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 ABCF3Q9NUQ8 709 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 PIH1D1Q9NWS0 290 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 NDE1Q9NXR1 346 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 ASIC5Q9NY37 505 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 C6orf203Q9P0P8 240 aaPredicted RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 EPS15L1Q9UBC2 864 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 BCAP29Q9UHQ4 241 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 FBXL5Q9UKA1 691 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 HDAC9Q9UKV0 1011 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 SCINQ9Y6U3 715 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 MYH8P13535 1937 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 FRMPD4Q14CM0 1322 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 MAP2P11137 1827 aaKnown RBP4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 ITGB4P16144 1822 aa4.67□□□□□ -1.66
PDLIM5-211ENST00000508531 A0A087WWV3 80 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 A0A0D9SFI3 127 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 PVALEFA0A1B0GWK0 134 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 SIGLEC16A6NMB1 481 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 SYCE1LA8MT33 242 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 CENPBD1B2RD01 187 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 FBP2O00757 339 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 XPO1O14980 1071 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 MCF2LO15068 1137 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 CNOT3O75175 753 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 GCATO75600 419 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 TNFAIP8O95379 198 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 PSMG1O95456 288 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 GGPS1O95749 300 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 GNA14O95837 355 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 FGBP02675 491 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 CYP21A2P08686 494 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 ALOX5P09917 674 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 MYCLP12524 364 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 RPL17P18621 184 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 EN2P19622 333 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 MARCKSP29966 332 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 STX2P32856 288 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 S100A5P33763 92 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 TTKP33981 857 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 MXI1P50539 228 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 NR1H2P55055 460 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 COG7P83436 770 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 CAV1Q03135 178 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 LPIN1Q14693 890 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 P3H1Q32P28 736 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 DNAL1Q4LDG9 190 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 PLA1AQ53H76 456 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 LMBRD2Q68DH5 695 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 NIPAL1Q6NVV3 410 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 ZNF813Q6ZN06 617 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 IRF2BP2Q7Z5L9 587 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 BCDIN3DQ7Z5W3 292 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 VPS36Q86VN1 386 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 ERI1Q8IV48 349 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 VPS52Q8N1B4 723 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 SIRT6Q8N6T7 355 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 ARL10Q8N8L6 244 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 NCOA7Q8NI08 942 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 BPIFB1Q8TDL5 484 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 ADAMTS18Q8TE60 1221 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 RASSF5Q8WWW0 418 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 PRCCQ92733 491 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 ARHGEF2Q92974 986 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 BORCS5Q969J3 196 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 MED30Q96HR3 178 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 COG3Q96JB2 828 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 FAM227BQ96M60 508 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 CCDC138Q96M89 665 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 TTC25Q96NG3 672 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 INPP4AQ96PE3 977 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 CHP1Q99653 195 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 PRMT1Q99873 361 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 C17orf80Q9BSJ5 609 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 HGH1Q9BTY7 390 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 KLHL4Q9C0H6 718 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 DHX36Q9H2U1 1008 aaKnown RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 SLC38A10Q9HBR0 1119 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 AASDHPPTQ9NRN7 309 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 EHD2Q9NZN4 543 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 TBC1D7Q9P0N9 293 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 CRNNQ9UBG3 495 aaPredicted RBP4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 DNAJC12Q9UKB3 198 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 AMFRQ9UKV5 643 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 RABL2BQ9UNT1 228 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 ANKRD6Q9Y2G4 727 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 ZNF711Q9Y462 761 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 SNX9Q9Y5X1 595 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 IKBKGQ9Y6K9 419 aa4.66□□□□□ -1.66
PDLIM5-211ENST00000508531 MYO5AQ9Y4I1 1855 aaKnown RBP4.65□□□□□ -1.66
PDLIM5-211ENST00000508531 A0A087WWL8 130 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 A0A088AWK7 358 aa4.65□□□□□ -1.67
PDLIM5-211ENST00000508531 DYTNA2CJ06 578 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms