RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.2■□□□□ 0.18
LMNA-222ENST00000508500 KCTD6Q8NC69 237 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 ZNF248Q8NDW4 579 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 FAM46DQ8NEK8 389 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 NSMCE1Q8WV22 266 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 RAPGEF5Q92565 580 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 TSGA13Q96PP4 275 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 FRMD8Q9BZ67 464 aaPredicted RBP16.2■□□□□ 0.18
LMNA-222ENST00000508500 SPATS2LQ9NUQ6 558 aaKnown RBP16.2■□□□□ 0.18
LMNA-222ENST00000508500 UVRAGQ9P2Y5 699 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 MOSPD1Q9UJG1 213 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 PCDHGA8Q9Y5G5 932 aa16.2■□□□□ 0.18
LMNA-222ENST00000508500 A0A0J9YYE9 177 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 CDRT15L2A8MXV6 281 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 PSMD11O00231 422 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 TRBC1P01850 177 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 HLA-DQB2P05538 268 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 KELP23276 732 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 KDELR1P24390 212 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 CCNCP24863 283 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 POLD2P49005 469 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 CDK3Q00526 305 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 ITKQ08881 620 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 HLTFQ14527 1009 aaKnown RBP eCLIP16.19■□□□□ 0.18
LMNA-222ENST00000508500 IFI16Q16666 785 aaKnown RBP16.19■□□□□ 0.18
LMNA-222ENST00000508500 SPECC1LQ69YQ0 1117 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 TMPRSS9Q7Z410 1059 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 OR8K1Q8NGG5 319 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 WDR48Q8TAF3 677 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 GPBAR1Q8TDU6 330 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 CTNNBL1Q8WYA6 563 aaPredicted RBP16.19■□□□□ 0.18
LMNA-222ENST00000508500 FATE1Q969F0 183 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 GRAMD1AQ96CP6 724 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 FCRL3Q96P31 734 aaPredicted RBP16.19■□□□□ 0.18
LMNA-222ENST00000508500 AGAP2Q99490 1192 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 LGMNQ99538 433 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 POLR1EQ9GZS1 481 aaKnown RBP16.19■□□□□ 0.18
LMNA-222ENST00000508500 ABCG8Q9H221 673 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 LRRN3Q9H3W5 708 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 SYNDIG1Q9H7V2 258 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 RBM22Q9NW64 420 aaKnown RBP eCLIP16.19■□□□□ 0.18
LMNA-222ENST00000508500 CD84Q9UIB8 345 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 RNF215Q9Y6U7 377 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 COL6A6A6NMZ7 2263 aa16.19■□□□□ 0.18
LMNA-222ENST00000508500 ZNF462Q96JM2 2506 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 SSU72P8A0A1W2PR75 194 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 C3orf70A6NLC5 250 aaPredicted RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 D6RAR5 112 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 RPLP0P05388 317 aaKnown RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 MMP2P08253 660 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 TMEM253P0C7T8 217 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 AK4P27144 223 aaPredicted RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 TEAD1P28347 426 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 DPTQ07507 201 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 MESDQ14696 234 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 CERCAMQ5T4B2 595 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 LRRC66Q68CR7 880 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 C17orf82Q86X59 251 aaPredicted RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 VSTM4Q8IW00 320 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 WDR36Q8NI36 951 aaKnown RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 SLC35G2Q8TBE7 412 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 SCAMP4Q969E2 229 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 PDLIM2Q96JY6 352 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 RNF157Q96PX1 679 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 GFM1Q96RP9 751 aaKnown RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 TDRD1Q9BXT4 1180 aaKnown RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 FOXP3Q9BZS1 431 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 CARS2Q9HA77 564 aaKnown RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 PHPT1Q9NRX4 125 aaPredicted RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 ABHD10Q9NUJ1 306 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 SPTLC3Q9NUV7 552 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 DTLQ9NZJ0 730 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 APPL1Q9UKG1 709 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 ATXN7L1Q9ULK2 861 aaPredicted RBP16.18■□□□□ 0.18
LMNA-222ENST00000508500 CHKBQ9Y259 395 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 PLEKHM1Q9Y4G2 1056 aa16.18■□□□□ 0.18
LMNA-222ENST00000508500 CCDC187A0A096LP49 1063 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 B4DGG1 531 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 FGF1P05230 155 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 KRT7P08729 469 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 CCNB1P14635 433 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 GLB1P16278 677 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 MAN1A1P33908 653 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 B4GALNT1Q00973 533 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 C19orf57Q0VDD7 668 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 ARHGEF7Q14155 803 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 C14orf28Q4W4Y0 310 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 RAET1GQ6H3X3 334 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 TIGD7Q6NT04 549 aaPredicted RBP16.17■□□□□ 0.18
LMNA-222ENST00000508500 FOXR1Q6PIV2 292 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 USP45Q70EL2 814 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 PLD5Q8N7P1 536 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 CNTD1Q8N815 330 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 Q8N9G6 341 aaPredicted RBP16.17■□□□□ 0.18
LMNA-222ENST00000508500 HDAC11Q96DB2 347 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 LIN37Q96GY3 246 aaPredicted RBP16.17■□□□□ 0.18
LMNA-222ENST00000508500 WDR24Q96S15 920 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 DPEP2Q9H4A9 486 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms