RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CRCPO75575 148 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 GJB3O75712 270 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 KRT14P02533 472 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CSF2P04141 144 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 GNAI2P04899 355 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 INHBAP08476 426 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 WEE2P0C1S8 567 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 SUPT20HL2P0C7V6 817 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 PRR35P0CG20 571 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 RALAP11233 206 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 NPR1P16066 1061 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 PRKACBP22694 351 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 GLRA2P23416 452 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 EDNRBP24530 442 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ACAT1P24752 427 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 MCM3P25205 808 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 MSNP26038 577 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ALDH4A1P30038 563 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CTNNB1P35222 781 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 BMI1P35226 326 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 GGT5P36269 586 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 GCLCP48506 637 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CAMLGP49069 296 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 KHKP50053 298 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CDH8P55286 799 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 MRPS15P82914 257 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 HTRA4P83105 476 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 TFF2Q03403 129 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ABRQ12979 859 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 TARDBPQ13148 414 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 GPM6BQ13491 265 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 IL10RAQ13651 578 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ALCAMQ13740 583 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 DDX39BQ13838 428 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 IDI1Q13907 227 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 KCNJ12Q14500 433 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC29A2Q14542 456 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CLCA4Q14CN2 919 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 UGP2Q16851 508 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 AAK1Q2M2I8 961 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 LRIT3Q3SXY7 679 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 TBRG1Q3YBR2 411 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 KCTD21Q4G0X4 260 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 KHDC1Q4VXA5 237 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 PABPC1LQ4VXU2 614 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 FASTKD1Q53R41 847 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZNF569Q5MCW4 686 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 SPATA46Q5T0L3 261 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 METTL11BQ5VVY1 283 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZNF626Q68DY1 528 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 TRAT1Q6PIZ9 186 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CORO6Q6QEF8 472 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 METAP1DQ6UB28 335 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 MFSD7Q6UXD7 560 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZNF782Q6ZMW2 699 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 H1FNTQ75WM6 255 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CHST9Q7L1S5 443 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 DGLUCYQ7Z3D6 616 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 SPATA21Q7Z572 469 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 LUZP1Q86V48 1076 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 MPP5Q8N3R9 675 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 WDTC1Q8N5D0 677 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 LPCAT1Q8NF37 534 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 NSMCE1Q8WV22 266 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 CDKL2Q92772 493 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 RAB7BQ96AH8 199 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC22A18Q96BI1 424 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 SPACA9Q96E40 222 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZBTB18Q99592 522 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 MGME1Q9BQP7 344 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 RIOK1Q9BRS2 568 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 UQCC2Q9BRT2 126 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 MTG1Q9BT17 334 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 TRIM54Q9BYV2 358 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 PUS3Q9BZE2 481 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 WNT5BQ9H1J7 359 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 TFB2MQ9H5Q4 396 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 POLR1BQ9H9Y6 1135 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 HOMER3Q9NSC5 361 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 BEX4Q9NWD9 120 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ARHGEF38Q9NXL2 777 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 HCN3Q9P1Z3 774 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ANKMY1Q9P2S6 941 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 MAD2L2Q9UI95 211 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC45A2Q9UMX9 530 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 STX8Q9UNK0 236 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 TDRKHQ9Y2W6 561 aaKnown RBP3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 COMMD3-BMI1R4GMX3 469 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 ADGRA2Q96PE1 1338 aa3.66□□□□□ -1.82
HMGB3P15-201ENST00000507326 PLEKHG2Q9H7P9 1386 aa3.65□□□□□ -1.82
HMGB3P15-201ENST00000507326 GOLGA6L7A0A1B0GV03 622 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 WDR27A2RRH5 827 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 XKRY2A2RUG3 117 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 HTR3EA5X5Y0 456 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ARHGAP42A6NI28 874 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 A6NL46 340 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 OR6C76A6NM76 312 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 HSBP1L1C9JCN9 74 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MAPK13O15264 365 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 YKT6O15498 198 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms