RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MARC1Q5VT66 337 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 HGSNATQ68CP4 663 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 RAET1GQ6H3X3 334 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 CAVIN1Q6NZI2 390 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 Q6ZVL8 140 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 USP45Q70EL2 814 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 TSPAN33Q86UF1 283 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 NRROSQ86YC3 692 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 SLITRK4Q8IW52 837 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 ZDHHC1Q8WTX9 485 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 GSDMCQ9BYG8 508 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 KCTD5Q9NXV2 234 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 TAAR2Q9P1P5 351 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 IP6K2Q9UHH9 426 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 ANAPC7Q9UJX3 599 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 ACSL6Q9UKU0 697 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 SUFUQ9UMX1 484 aa11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 SMG1Q96Q15 3661 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-204ENST00000507293 PRAMEF33A0A0G2JMD5 474 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 A0A0U1RQS6 177 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 RHPN2P1A8MT19 583 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 EFSO43281 561 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 B4GAT1O43505 415 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 MFSD11O43934 449 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 PRAMEF10O60809 474 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 FGF1P05230 155 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 LIPCP11150 499 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 AK4P27144 223 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 POLD2P49005 469 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 MAPK10P53779 464 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 CDH6P55285 790 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 B4GALNT1Q00973 533 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 NR1I3Q14994 352 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 IQCB1Q15051 598 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 AMZ1Q400G9 498 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 RALGPS1Q5JS13 557 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 DOK6Q6PKX4 331 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 SLC30A9Q6PML9 568 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 RFLNAQ6ZTI6 216 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 ZNF438Q7Z4V0 828 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 C17orf82Q86X59 251 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 CBARPQ8N350 705 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 NIPA2Q8N8Q9 360 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 PIH1D2Q8WWB5 315 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 TMEM159Q96B96 161 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 SCRN2Q96FV2 425 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 SMIM14Q96QK8 99 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 MCCC1Q96RQ3 725 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 SEMA3CQ99985 751 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 FUCA2Q9BTY2 467 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 NUP85Q9BW27 656 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 SEMA6CQ9H3T2 930 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 RDH14Q9HBH5 336 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 NT5MQ9NPB1 228 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 TRNAU1APQ9NX07 287 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 CD84Q9UIB8 345 aa11.52□□□□□ -0.57
HMGCS1-204ENST00000507293 SDK2Q58EX2 2172 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 MGAQ8IWI9 3026 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 NVLO15381 856 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 ECEL1O95672 775 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 CPNE6O95741 557 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 SOD1P00441 154 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 IVLP07476 585 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 PDHA1P08559 390 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 CD48P09326 243 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 TEAD1P28347 426 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 GJC1P36383 396 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 ADCY8P40145 1251 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 SSR1P43307 286 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 GPR1P46091 355 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 OR1D5P58170 312 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 CTBSQ01459 385 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 ITKQ08881 620 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 C16orf72Q14CZ0 275 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 LRRC66Q68CR7 880 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 TECPR1Q7Z6L1 1165 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 PIM3Q86V86 326 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 ZFAND4Q86XD8 727 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 TEX26Q8N6G2 289 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 PATE1Q8WXA2 126 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 USP7Q93009 1102 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 MED8Q96G25 268 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 CMKLR1Q99788 373 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 FOXJ2Q9P0K8 574 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 RCOR3Q9P2K3 495 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 SLC17A4Q9Y2C5 497 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 ST14Q9Y5Y6 855 aa11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 BZW2Q9Y6E2 419 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-204ENST00000507293 HELZ2Q9BYK8 2649 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 A0A087X0T9 212 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 A0A1W2PQJ5 194 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 C9orf172C9J069 976 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 J3QKU1 62 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 FZD6O60353 706 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 MAP3K6O95382 1288 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 SERPING1P05155 500 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 CYP1A2P05177 515 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 FAM228BP0C875 321 aa11.5□□□□□ -0.57
HMGCS1-204ENST00000507293 KRT10P13645 584 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms