RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TDRD6O60522 2096 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 SPEGQ15772 3267 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 PCNX2A6NKB5 2137 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 CEP104O60308 925 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 ZNF189O75820 626 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 EPOP01588 193 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 FGGP02679 453 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 ATP1A1P05023 1023 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 ITGAVP06756 1048 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 CEACAM1P13688 526 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 GRK6P43250 576 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 GEMP55040 296 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 DPTQ07507 201 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 PTK2BQ14289 1009 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 KLHDC8BQ8IXV7 354 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 RBFAQ8N0V3 343 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 SLC25A45Q8N413 288 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 SCAMP4Q969E2 229 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 RTP4Q96DX8 246 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 WDR24Q96S15 920 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 FICDQ9BVA6 458 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 LGR4Q9BXB1 951 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 FRMD8P1Q9BZ68 369 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 SLC32A1Q9H598 525 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 MAGEE1Q9HCI5 957 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 SHOC2Q9UQ13 582 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 ZNF711Q9Y462 761 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 BPTFQ12830 3046 aa18.21■□□□□ 0.51
PDLIM7-216ENST00000506537 SPAARA0A1B0GVQ0 90 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 AURKAO14965 403 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 GCATO75600 419 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 TSHRP16473 764 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 DGKAP23743 735 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 ADRA1AP35348 466 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 SPINT3P49223 89 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 KIAA1024LP59773 190 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 SLC1A5Q15758 541 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 ZNF765Q7L2R6 523 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 SLC25A41Q8N5S1 370 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 ZNF548Q8NEK5 533 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 RHBDD1Q8TEB9 315 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 AGAP2Q99490 1192 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 WDR26Q9H7D7 661 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 KCTD5Q9NXV2 234 aa18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 COL5A1P20908 1838 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-216ENST00000506537 ARID1BQ8NFD5 2236 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 GOLGA6CA6NDK9 693 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 GOLGA6BA6NDN3 693 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 TMEM202A6NGA9 273 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 KIF5CO60282 957 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 ANXA9O76027 345 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 METTL18O95568 372 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 AGTP01019 485 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 SLC4A1P02730 911 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 HOXC4P09017 264 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 GOLGA6DP0CG33 693 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 GIMD1P0DJR0 217 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 JUNDP17535 347 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 HLA-DPA1P20036 260 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 SNX1Q13596 522 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 ALG11Q2TAA5 492 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 RAET1GQ6H3X3 334 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 ARHGEF18Q6ZSZ5 1173 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 TMC3Q7Z5M5 1100 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 HEATR4Q86WZ0 1026 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 PHACTR4Q8IZ21 702 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 NRSN1Q8IZ57 195 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 AP2M1Q96CW1 435 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 PDXPQ96GD0 296 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 WDR92Q96MX6 357 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 RIOK2Q9BVS4 552 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 FSD1LQ9BXM9 530 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 TEX101Q9BY14 249 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 ZFYVE1Q9HBF4 777 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 GOLGA6AQ9NYA3 693 aa18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.19■□□□□ 0.5
PDLIM7-216ENST00000506537 NCOR2Q9Y618 2525 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 MED19A0JLT2 244 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 CACNB4O00305 520 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 FGF1P05230 155 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 MYCLP1P12525 358 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 TEAD1P28347 426 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 HNRNPKP61978 463 aaKnown RBP eCLIP18.18■□□□□ 0.52e-6■■□□□ 12.9
PDLIM7-216ENST00000506537 CDK3Q00526 305 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 TRIP6Q15654 476 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 CCNG2Q16589 344 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 HENMT1Q5T8I9 393 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 N4BP2L1Q5TBK1 243 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 FAXCQ5TGI0 409 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 CCDC70Q6NSX1 233 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 ENPP7Q6UWV6 458 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 RANBP10Q6VN20 620 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 PRUNE1Q86TP1 453 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 RAVER1Q8IY67 606 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 RASGEF1CQ8N431 466 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 TTC30BQ8N4P2 665 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 EID2Q8N6I1 236 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 GLIS1Q8NBF1 620 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 CCHCR1Q8TD31 782 aa18.18■□□□□ 0.5
PDLIM7-216ENST00000506537 OR1E3Q8WZA6 343 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms