RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 CDK3Q00526 305 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 SPIDRQ14159 915 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 HLTFQ14527 1009 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 FOXR1Q6PIV2 292 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 C17orf82Q86X59 251 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 VSTM4Q8IW00 320 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 CNTD1Q8N815 330 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 ZNF248Q8NDW4 579 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 WDR48Q8TAF3 677 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 CTNNBL1Q8WYA6 563 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 SCAMP4Q969E2 229 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 RNF157Q96PX1 679 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 FOXP3Q9BZS1 431 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 POLR1EQ9GZS1 481 aaKnown RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 DPEP2Q9H4A9 486 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 SUDS3Q9H7L9 328 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 SYNDIG1Q9H7V2 258 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 CARS2Q9HA77 564 aaKnown RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 PHPT1Q9NRX4 125 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 DTLQ9NZJ0 730 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 APPL1Q9UKG1 709 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 ATXN7L1Q9ULK2 861 aaPredicted RBP14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 SSUH2Q9Y2M2 353 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 PCDHGA8Q9Y5G5 932 aa14.37□□□□□ -0.11
CDC42SE2-209ENST00000506419 A0A0J9YYE9 177 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 CDRT15L2A8MXV6 281 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 JCHAINP01591 159 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 TRBC1P01850 177 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 HLA-DQB2P05538 268 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 MMP2P08253 660 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 KRT7P08729 469 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 CCNB1P14635 433 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 GLB1P16278 677 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 CES1P23141 567 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 AK4P27144 223 aaPredicted RBP14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 TEAD1P28347 426 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 RBMS1P29558 406 aaKnown RBP14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 PCBP4P57723 403 aaKnown RBP14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 B4GALNT1Q00973 533 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 DPTQ07507 201 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 ARHGEF7Q14155 803 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 C14orf28Q4W4Y0 310 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 CERCAMQ5T4B2 595 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 LRRC66Q68CR7 880 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 USP45Q70EL2 814 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 TMPRSS9Q7Z410 1059 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 NLRP8Q86W28 1048 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 MAP7D3Q8IWC1 876 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 OR6C4Q8NGE1 309 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 WDR36Q8NI36 951 aaKnown RBP14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 GFM1Q96RP9 751 aaKnown RBP14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 WDR24Q96S15 920 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 LGMNQ99538 433 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 KCTD5Q9NXV2 234 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 LRIT1Q9P2V4 623 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 SUFUQ9UMX1 484 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 SLC17A4Q9Y2C5 497 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 TMEM98Q9Y2Y6 226 aa14.36□□□□□ -0.11
CDC42SE2-209ENST00000506419 CCDC187A0A096LP49 1063 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 B4DGG1 531 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 CBFA2T2O43439 604 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 AKR1B10O60218 316 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 TNFSF15O95150 251 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 CLDN7O95471 211 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 TPM3P06753 285 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 PTMSP20962 102 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 MAN1A1P33908 653 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 ADCY8P40145 1251 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 GPR1P46091 355 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 GNPDA1P46926 289 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 STC1P52823 247 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 MAZP56270 477 aaKnown RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 CTBSQ01459 385 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 ZFP36L1Q07352 338 aaKnown RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 RAET1GQ6H3X3 334 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 TIGD7Q6NT04 549 aaPredicted RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 PCSK4Q6UW60 755 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 CCNJLQ8IV13 435 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 PLD5Q8N7P1 536 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 CCNYQ8ND76 341 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 AP2M1Q96CW1 435 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 SCARF2Q96GP6 870 aaPredicted RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 FCRL3Q96P31 734 aaPredicted RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 TDRD1Q9BXT4 1180 aaKnown RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 NHEJ1Q9H9Q4 299 aaPredicted RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 CPNE5Q9HCH3 593 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 THSD1Q9NS62 852 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 ABHD10Q9NUJ1 306 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 TRNAU1APQ9NX07 287 aaKnown RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 TAAR2Q9P1P5 351 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 AMACRQ9UHK6 382 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 CNOT6Q9ULM6 557 aaKnown RBP14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 KALRNO60229 2985 aa14.35□□□□□ -0.11
CDC42SE2-209ENST00000506419 GOLGA6CA6NDK9 693 aa14.34□□□□□ -0.11
CDC42SE2-209ENST00000506419 GOLGA6BA6NDN3 693 aa14.34□□□□□ -0.11
CDC42SE2-209ENST00000506419 D6RAR5 112 aa14.34□□□□□ -0.11
CDC42SE2-209ENST00000506419 KCNK1O00180 336 aa14.34□□□□□ -0.11
CDC42SE2-209ENST00000506419 KLK10O43240 276 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms