RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 VWA5AO00534 786 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 NRP1O14786 923 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 TPST1O60507 370 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 PRSS23O95084 383 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 KCNH1O95259 989 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 ARSFP54793 590 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 SLC12A2P55011 1212 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 TPTEP56180 551 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 PLCL1Q15111 1095 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 TECRLQ5HYJ1 363 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 PCID2Q5JVF3 399 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 PERM1Q5SV97 790 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 SLC41A1Q8IVJ1 513 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 KLHDC8BQ8IXV7 354 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 SCML4Q8N228 414 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 MFSD4AQ8N468 514 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 PDZD8Q8NEN9 1154 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 OR7A2PQ8NGA2 310 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 FEM1AQ9BSK4 669 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 CDT1Q9H211 546 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 DNMT3BQ9UBC3 853 aaKnown RBP15.89■□□□□ 0.13
SCLT1-208ENST00000506368 TESMINQ9Y4I5 508 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 ST14Q9Y5Y6 855 aa15.89■□□□□ 0.13
SCLT1-208ENST00000506368 ILVBLA1L0T0 632 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 INPP4BO15327 924 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 VPS4BO75351 444 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PGK1P00558 417 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 AHSGP02765 367 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 GSNP06396 782 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 SLC10A3P09131 477 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 THRBP10828 461 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 HDCP19113 662 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 OXTRP30559 389 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 ZNF135P52742 658 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PPP5CP53041 499 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 BST2Q10589 180 aaKnown RBP15.88■□□□□ 0.13
SCLT1-208ENST00000506368 AQP6Q13520 282 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 CTF1Q16619 201 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 KIF19Q2TAC6 998 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PPP1R26Q5T8A7 1209 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-208ENST00000506368 UGT3A1Q6NUS8 523 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 RETREG3Q86VR2 466 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 DCP1BQ8IZD4 617 aaKnown RBP15.88■□□□□ 0.13
SCLT1-208ENST00000506368 CLYBLQ8N0X4 340 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 OR6Q1Q8NGQ2 317 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 BPIFB1Q8TDL5 484 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 HDAC11Q96DB2 347 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 C19orf60Q96EN9 201 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 TSPAN17Q96FV3 270 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 CAPNS2Q96L46 248 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PPP1R2P1Q96PQ5 205 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 HERC2P3Q9BVR0 1158 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 HOXD1Q9GZZ0 328 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 ALG2Q9H553 416 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 CHRAC1Q9NRG0 131 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 CMTM6Q9NX76 183 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PDE10AQ9Y233 779 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 IGKV6-21A0A0C4DH24 114 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 LACTBL1A8MY62 500 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 M0R3G1 203 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 FXYD1O00168 92 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 ASNA1O43681 348 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 TBC1D4O60343 1298 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 HNRNPLP14866 589 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PAMP19021 973 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 HTR1EP28566 365 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 NOS2P35228 1153 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 SLC26A3P40879 764 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 YAP1P46937 504 aaKnown RBP15.88■□□□□ 0.13
SCLT1-208ENST00000506368 VEGFBP49765 207 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 STAT5BP51692 787 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PHC1P78364 1004 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 ECT2LQ008S8 904 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 IL18R1Q13478 541 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 STXBP2Q15833 593 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 HIST2H2ACQ16777 129 aaPredicted RBP15.88■□□□□ 0.13
SCLT1-208ENST00000506368 TMEM132AQ24JP5 1023 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 SLC25A52Q3SY17 297 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 TIGD2Q4W5G0 525 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 C6orf183Q5T699 404 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 JADE1Q6IE81 842 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PRSS48Q7RTY5 328 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 R3HCC1LQ7Z5L2 792 aaKnown RBP15.88■□□□□ 0.13
SCLT1-208ENST00000506368 UNC93AQ86WB7 457 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 L3HYPDHQ96EM0 354 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 MS4A4AQ96JQ5 239 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 HSFY1Q96LI6 401 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 NFKBIZQ9BYH8 718 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 EGFL7Q9UHF1 273 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 STAP1Q9ULZ2 295 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 SLC27A5Q9Y2P5 690 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 PCDHGA11Q9Y5H2 935 aa15.88■□□□□ 0.13
SCLT1-208ENST00000506368 FAM172BPA6NC97 362 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 GRXCR2A6NFK2 248 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 A8MT66 165 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 NR5A2O00482 541 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 FARP2O94887 1054 aaPredicted RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 FGF4P08620 206 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 CDH1P12830 882 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 IMPDH1P20839 514 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms