RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 LRRK2Q5S007 2527 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 LOC101059948A0A1B0GTJ6 334 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 FIGNL2A6NMB9 653 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 TTLL8A6PVC2 850 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 PPM1DO15297 605 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 GM2AP17900 193 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 NR1D1P20393 614 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 OAS2P29728 719 aaKnown RBP9.2□□□□□ -0.94
PTPN20-216ENST00000506080 CSF2RBP32927 897 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 TRIM23P36406 574 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 STAT1P42224 750 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 GNPDA1P46926 289 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 RGRP47804 291 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 PPM1FP49593 454 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-216ENST00000506080 HDAC4P56524 1084 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 ILF3Q12906 894 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPN20-216ENST00000506080 RALGDSQ12967 914 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 TRA2AQ13595 282 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPN20-216ENST00000506080 GRM3Q14832 879 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 NR1D2Q14995 579 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 LACTB2Q53H82 288 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-216ENST00000506080 DCAF12Q5T6F0 453 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 ATP1A1-AS1Q5TC04 95 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 PNCKQ6P2M8 343 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 BRAT1Q6PJG6 821 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 SLC30A9Q6PML9 568 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 ARCQ7LC44 396 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 PAF1Q8N7H5 531 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 RTL3Q8N8U3 475 aaKnown RBP9.2□□□□□ -0.94
PTPN20-216ENST00000506080 OR4D9Q8NGE8 314 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 FAM172AQ8WUF8 416 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 MIB2Q96AX9 1013 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 SLC45A3Q96JT2 553 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 ZNF641Q96N77 438 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-216ENST00000506080 DDA1Q9BW61 102 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 GSDMCQ9BYG8 508 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 WDR26Q9H7D7 661 aa9.2□□□□□ -0.94
PTPN20-216ENST00000506080 UBA2Q9UBT2 640 aaPredicted RBP9.2□□□□□ -0.94
PTPN20-216ENST00000506080 IGHV1OR21-1A0A087WYE8 117 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 PRR19A6NJB7 356 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 C2CD4BA6NLJ0 364 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 A8MU76 341 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 J3KR12 359 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 ZW10O43264 779 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 CREB3O43889 395 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 LSM8O95777 96 aaKnown RBP9.19□□□□□ -0.94
PTPN20-216ENST00000506080 FUCA1P04066 466 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 HOXC4P09017 264 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-216ENST00000506080 THRAP10827 490 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 MLLT10P55197 1068 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 YBEYP58557 167 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-216ENST00000506080 ACOX1Q15067 660 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 CLPPQ16740 277 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-216ENST00000506080 SNAP47Q5SQN1 464 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 STRADAQ7RTN6 431 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 ATCAYQ86WG3 371 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 ZNF761Q86XN6 746 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-216ENST00000506080 NLGN4XQ8N0W4 816 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 NAGSQ8N159 534 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 NLGN4YQ8NFZ3 816 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-216ENST00000506080 SLC30A5Q8TAD4 765 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 APOBEC4Q8WW27 367 aaKnown RBP9.19□□□□□ -0.94
PTPN20-216ENST00000506080 KIAA1143Q96AT1 154 aaPredicted RBP9.19□□□□□ -0.94
PTPN20-216ENST00000506080 TUBGCP5Q96RT8 1024 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 CTRCQ99895 268 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 C11orf70Q9BRQ4 267 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 ASPSCR1Q9BZE9 553 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 KCNK4Q9NYG8 393 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 RWDD2AQ9UIY3 292 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 PILRAQ9UKJ1 303 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 TP53TG5Q9Y2B4 290 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 ST14Q9Y5Y6 855 aa9.19□□□□□ -0.94
PTPN20-216ENST00000506080 TRBV23OR9-2A0A075B6M9 112 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 CFAP69A5D8W1 941 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 B4E171 279 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 K7EM74 188 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 PDE2AO00408 941 aaPredicted RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 CEACAM5P06731 702 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 KRT7P08729 469 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 MYCLP1P12525 358 aaPredicted RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 SERPINA4P29622 427 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 TSPAN7P41732 249 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 PTPN9P43378 593 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 GPR3P46089 330 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 UQCRFS1P47985 274 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 RAB15P59190 212 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 CTBSQ01459 385 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 KLRB1Q12918 225 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 PARP15Q460N3 678 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 DENND2CQ68D51 928 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 DPY19L2P1Q6NXN4 242 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 SCYL2Q6P3W7 929 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 TMEM71Q6P5X7 295 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 DPPA4Q7L190 304 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 TIPARPQ7Z3E1 657 aaKnown RBP9.18□□□□□ -0.94
PTPN20-216ENST00000506080 KDELC2Q7Z4H8 507 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 SLFN11Q7Z7L1 901 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 SRLQ86TD4 932 aa9.18□□□□□ -0.94
PTPN20-216ENST00000506080 HEATR4Q86WZ0 1026 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms