RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 EIF5P55010 431 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 DSCR9P59020 149 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 KRTAP10-11P60412 298 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 MYBPHQ13203 477 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 NFATC4Q14934 902 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 HLFQ16534 295 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 KRT24Q2M2I5 525 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 CDONQ4KMG0 1287 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 PPP6R3Q5H9R7 873 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 LRCH2Q5VUJ6 765 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 SIGIRRQ6IA17 410 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 KLHL35Q6PF15 583 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 RHBDF2Q6PJF5 856 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 ZNF517Q6ZMY9 492 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 SPATA2LQ8IUW3 424 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 WDTC1Q8N5D0 677 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 C9orf106Q8NAJ2 232 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 ARHGEF26Q96DR7 871 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 THOC3Q96J01 351 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 MARK4Q96L34 752 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 CMTM3Q96MX0 182 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 FIZ1Q96SL8 496 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 PDZD7Q9H5P4 517 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 MMP25Q9NPA2 562 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 TINAGQ9UJW2 476 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 TTC7AQ9ULT0 858 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 LAS1LQ9Y4W2 734 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 LYVE1Q9Y5Y7 322 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 TAF1P21675 1872 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 FRMD3A2A2Y4 597 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 MYO1GB0I1T2 1018 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 BTBD18B2RXH4 712 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 PLRG1O43660 514 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 SLC28A2O43868 658 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 PAPSS2O95340 614 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 FCGR1AP12314 374 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 RAD23BP54727 409 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 GALCP54803 685 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 ZXDBP98169 803 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 GKAP1Q5VSY0 366 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 WDR73Q6P4I2 378 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 TTC39CQ8N584 583 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 ZNF114Q8NC26 417 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 NUDCD2Q8WVJ2 157 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 RRNAD1Q96FB5 475 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 MED30Q96HR3 178 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 HARBI1Q96MB7 349 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 ACOX2Q99424 681 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 PCGF1Q9BSM1 259 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 IL25Q9H293 177 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 WDR26Q9H7D7 661 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 KAT14Q9H8E8 782 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 C17orf75Q9HAS0 396 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 TBC1D22BQ9NU19 505 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 ACSS1Q9NUB1 689 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 NFS1Q9Y697 457 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 MAU2Q9Y6X3 613 aa4.06□□□□□ -1.76
TOPBP1-204ENST00000505804 IGLV5-37A0A075B6J1 123 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 IGKV2D-30A0A075B6S6 120 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 FSD2A1L4K1 749 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 SRRM3A6NNA2 597 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 PTGES3LE9PB15 166 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 AP3D1O14617 1153 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 KCNAB3O43448 404 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 JRKO75564 520 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 CLDN14O95500 239 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 IGHV4-30-4P0DP06 118 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 DDX5P17844 614 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 CDH2P19022 906 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 CCKARP32238 428 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 HADHAP40939 763 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 PEX5P50542 639 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 HNRNPH2P55795 449 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 SEC61A1P61619 476 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 TUBA1BP68363 451 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 GRIK2Q13002 908 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 HNRNPA0Q13151 305 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 NAB2Q15742 525 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 CTF1Q16619 201 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 SETMARQ53H47 684 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 LRIF1Q5T3J3 769 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 ITPRIPL1Q6GPH6 555 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 DUS1LQ6P1R4 473 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 CRELD2Q6UXH1 353 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 GLDNQ6ZMI3 551 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 DPPA4Q7L190 304 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 CHERPQ8IWX8 916 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 SCFD2Q8WU76 684 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 POMGNT1Q8WZA1 660 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 SGCDQ92629 289 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 MTBPQ96DY7 904 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 C1orf74Q96LT6 269 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 C3orf30Q96M34 536 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 SH3GL2Q99962 352 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 MTMR6Q9Y217 621 aa4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 R3HDM2Q9Y2K5 976 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-204ENST00000505804 NDUFS3O75489 264 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 GAGE7O76087 117 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 KDM4BO94953 1096 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 OR2C1O95371 312 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms