RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TTC30BQ8N4P2 665 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 MYO19Q96H55 970 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 MAELQ96JY0 434 aaKnown RBP17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 EXOC2Q96KP1 924 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 SUDS3Q9H7L9 328 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 NDE1Q9NXR1 346 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 CFAP97Q9P2B7 532 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 CRYL1Q9Y2S2 319 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 ACTL7AQ9Y615 435 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 SYCE1LA8MT33 242 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 GRID2O43424 1007 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 PGLSO95336 258 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 THRAP10827 490 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 EPHA5P54756 1037 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 UBE3AQ05086 875 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 RAD51Q06609 339 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 NAA25Q14CX7 972 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 PREPLQ4J6C6 727 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 SLC9B1Q4ZJI4 515 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 GPR158Q5T848 1215 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 ICE2Q659A1 982 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 KDM1BQ8NB78 822 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 SP7Q8TDD2 431 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 DENND2DQ9H6A0 471 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 EBF2Q9HAK2 575 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 ABCB8Q9NUT2 735 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 ZDHHC2Q9UIJ5 367 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 PLA2G4CQ9UP65 541 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 PCDHGC4Q9Y5F7 938 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 PCNTO95613 3336 aa17.25■□□□□ 0.35
TRAPPC11-204ENST00000505676 A8MUI8 341 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 VPS26AO75436 327 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 SRP72O76094 671 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 RHOBTB1O94844 696 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 IGSF6O95976 241 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ACRP10323 421 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 HOXA9P31269 272 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 CA8P35219 290 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 HMGCLP35914 325 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PTGER3P43115 390 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 CCNG1P51959 295 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PTPN5P54829 565 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 LYPLAL1Q5VWZ2 237 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 SCUBE1Q8IWY4 988 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 MAB21L3Q8N8X9 362 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 KLHL23Q8NBE8 558 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 STAG3L4Q8TBR4 150 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ANKRD49Q8WVL7 239 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 KIAA1191Q96A73 305 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ISG20Q96AZ6 181 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 RTKNQ9BST9 563 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 CD248Q9HCU0 757 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PCDHB1Q9Y5F3 818 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 OAS3Q9Y6K5 1087 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 A0A1W2PQ67 120 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ZBBXA8MT70 800 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PEX11AO75192 247 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ESR1P03372 595 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PDHA1P08559 390 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PIRTP0C851 137 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 SP100P23497 879 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 HERVK_113P63132 956 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 CYP4F8P98187 520 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 CACNG1Q06432 222 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 KLF10Q13118 480 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 SEMA3AQ14563 771 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ARHGAP15Q53QZ3 475 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PPM1LQ5SGD2 360 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PSRC1Q6PGN9 363 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 OTOP2Q7RTS6 562 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 LDB1Q86U70 411 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 RNF135Q8IUD6 432 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 CEP70Q8NHQ1 597 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 RP9Q8TA86 221 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 PHOSPHO2Q8TCD6 241 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ACTRT2Q8TDY3 377 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ZBED2Q9BTP6 218 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ERVK-6Q9BXR3 956 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ZNF711Q9Y462 761 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 ANKRD36A6QL64 1941 aa17.24■□□□□ 0.35
TRAPPC11-204ENST00000505676 CCL22O00626 93 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 HTRA2O43464 458 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 KERAO60938 352 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 MC4RP32245 332 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 INHBCP55103 352 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 BCL2L1Q07817 233 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 LINGO4Q6UY18 593 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 HOMEZQ8IX15 550 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 KCNJ9Q92806 393 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 NSMCE3Q96MG7 304 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 RAD9AQ99638 391 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 ALG9Q9H6U8 611 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 ATP13A3Q9H7F0 1226 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 POLR3BQ9NW08 1133 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 LEFTY2O00292 366 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 PKMP14618 531 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 LSM12Q3MHD2 195 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms