RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 TRAV19A0A0A6YYK7 116 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 FGF3P11487 239 aaPredicted RBP13.25□□□□□ -0.29
CCSER1-205ENST00000505073 GP5P40197 560 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 SLC7A9P82251 487 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 NAB1Q13506 487 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 PDPK2PQ6A1A2 396 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 POTEHQ6S545 545 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 ALDH16A1Q8IZ83 802 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 TADA1Q96BN2 335 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 NSMCE3Q96MG7 304 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 ZNF599Q96NL3 588 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 CINPQ9BW66 212 aaPredicted RBP13.25□□□□□ -0.29
CCSER1-205ENST00000505073 ACE2Q9BYF1 805 aaPredicted RBP13.25□□□□□ -0.29
CCSER1-205ENST00000505073 SHCBP1LQ9BZQ2 653 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 RETREG1Q9H6L5 497 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 TIMMDC1Q9NPL8 285 aa13.25□□□□□ -0.29
CCSER1-205ENST00000505073 LSM7Q9UK45 103 aaKnown RBP13.25□□□□□ -0.29
CCSER1-205ENST00000505073 CCDC160A6NGH7 325 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 PER2O15055 1255 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 LATS1O95835 1130 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 GSRP00390 522 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 IDH3AP50213 366 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 MTTPP55157 894 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 CNGA3Q16281 694 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 ZNF697Q5TEC3 545 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 PQLC1Q8N2U9 271 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 HJURPQ8NCD3 748 aaPredicted RBP13.24□□□□□ -0.29
CCSER1-205ENST00000505073 PLEKHG4BQ96PX9 1271 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 CPNE1Q99829 537 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 MTIF3Q9H2K0 278 aaKnown RBP13.24□□□□□ -0.29
CCSER1-205ENST00000505073 RHBDL2Q9NX52 303 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 UBAP1Q9NZ09 502 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 SEPT3Q9UH03 358 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 PSMD13Q9UNM6 376 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 A0A0J9YVX5 310 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 GFRA2O00451 464 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 TPP1O14773 563 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 DNAJA2O60884 412 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 VAPBO95292 243 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 ALDOAP04075 364 aaKnown RBP13.24□□□□□ -0.29
CCSER1-205ENST00000505073 CNTFP26441 200 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 GMPRP36959 345 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 SERPINH1P50454 418 aaKnown RBP13.24□□□□□ -0.29
CCSER1-205ENST00000505073 ARF5P84085 180 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 FRG1Q14331 258 aaKnown RBP13.24□□□□□ -0.29
CCSER1-205ENST00000505073 CYTH1Q15438 398 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 SIRPB2Q5JXA9 342 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 GPR158Q5T848 1215 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 TIFABQ6ZNK6 161 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 TPGS1Q6ZTW0 290 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 AHI1Q8N157 1196 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 ZNF696Q9H7X3 374 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 ARNT2Q9HBZ2 717 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 DNMT3BQ9UBC3 853 aaKnown RBP13.24□□□□□ -0.29
CCSER1-205ENST00000505073 RAB26Q9ULW5 256 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 CCL26Q9Y258 94 aa13.24□□□□□ -0.29
CCSER1-205ENST00000505073 PRRC2BQ5JSZ5 2229 aaKnown RBP13.24□□□□□ -0.29
CCSER1-205ENST00000505073 CDH23Q9H251 3354 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 hCG_2014768A0A024R1R8 64 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 E2F8A0AVK6 867 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 LEFTY2O00292 366 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 TNFAIP8O95379 198 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 PRKCGP05129 697 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 CA3P07451 260 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 ATXN1LP0C7T5 689 aaKnown RBP13.23□□□□□ -0.29
CCSER1-205ENST00000505073 ALOX15P16050 662 aaPredicted RBP13.23□□□□□ -0.29
CCSER1-205ENST00000505073 NTHL1P78549 312 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 GRTP1Q5TC63 336 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 FRMD7Q6ZUT3 714 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 BBS5Q8N3I7 341 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 TDRD5Q8NAT2 981 aaKnown RBP13.23□□□□□ -0.29
CCSER1-205ENST00000505073 PPP4R1Q8TF05 950 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 DDI1Q8WTU0 396 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 RBBP8Q99708 897 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 MGME1Q9BQP7 344 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 GRIP2Q9C0E4 1043 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 EMCNQ9ULC0 261 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 TYW5A2RUC4 315 aaKnown RBP13.23□□□□□ -0.29
CCSER1-205ENST00000505073 ARNTP27540 789 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 PRDX6P30041 224 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 CSKP41240 450 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 CDH18Q13634 790 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 GALNT3Q14435 633 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 TEAD2Q15562 447 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 RARS2Q5T160 578 aaKnown RBP13.23□□□□□ -0.29
CCSER1-205ENST00000505073 HTR3DQ70Z44 454 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 CCDC117Q8IWD4 279 aaPredicted RBP13.23□□□□□ -0.29
CCSER1-205ENST00000505073 DCLK2Q8N568 766 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 EFCAB3Q8N7B9 438 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 PSKH2Q96QS6 385 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 SUDS3Q9H7L9 328 aaPredicted RBP13.23□□□□□ -0.29
CCSER1-205ENST00000505073 DDX18Q9NVP1 670 aaKnown RBP13.23□□□□□ -0.29
CCSER1-205ENST00000505073 VPS28Q9UK41 221 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 CLEC4EQ9ULY5 219 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 ARHGAP26Q9UNA1 814 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 RWDD3Q9Y3V2 267 aa13.23□□□□□ -0.29
CCSER1-205ENST00000505073 MYOFQ9NZM1 2061 aa13.22□□□□□ -0.29
CCSER1-205ENST00000505073 LOC285095A0A1B0GVY8 99 aa13.22□□□□□ -0.29
CCSER1-205ENST00000505073 CLASP2O75122 1294 aaKnown RBP13.22□□□□□ -0.29
CCSER1-205ENST00000505073 GLRA3O75311 464 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms