RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SP110Q9HB58 689 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PDFQ9HBH1 243 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 APMAPQ9HDC9 416 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PHPT1Q9NRX4 125 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 KIAA1468Q9P260 1216 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 B4GALT6Q9UBX8 382 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PILRAQ9UKJ1 303 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 SUFUQ9UMX1 484 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PLEKHM1Q9Y4G2 1056 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 MRPS18BQ9Y676 258 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 UBR5O95071 2799 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 CFAP69A5D8W1 941 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 C2CD4BA6NLJ0 364 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 ENO4A6NNW6 628 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 BHMG1C9JSJ3 638 aaPredicted RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 MKRN2OSH3BPM6 223 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 CCP110O43303 1012 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 VPS4BO75351 444 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 PALMO75781 387 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 FUCA1P04066 466 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 CEACAM5P06731 702 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 RNF224P0DH78 156 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 GM2AP17900 193 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 GPD1P21695 349 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 MAP4P27816 1152 aaKnown RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 ERCC5P28715 1186 aaPredicted RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 MAN1A1P33908 653 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 PTPN9P43378 593 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 GPR3P46089 330 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 POLD2P49005 469 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 TPI1P60174 286 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 CDK3Q00526 305 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 CTBSQ01459 385 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 MC1RQ01726 317 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 NFATC2Q13469 925 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 ERV3-1Q14264 604 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 CNGA3Q16281 694 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 AFMIDQ63HM1 303 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 TMEM71Q6P5X7 295 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 ASB18Q6ZVZ8 466 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 MARK2Q7KZI7 788 aaKnown RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 ARCQ7LC44 396 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 SRLQ86TD4 932 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 TRIM74Q86UV6 250 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 PACS2Q86VP3 889 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 BMPERQ8N8U9 685 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 OR10G6Q8NH81 332 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 HCAR2Q8TDS4 363 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 EPS8L1Q8TE68 723 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 SLC37A2Q8TED4 501 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 PDCD6IPQ8WUM4 868 aaKnown RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 NTAN1Q96AB6 310 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 TEFMQ96QE5 360 aaKnown RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 EFHD1Q9BUP0 239 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 FRMD8Q9BZ67 464 aaPredicted RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 RETREG1Q9H6L5 497 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 NPDC1Q9NQX5 325 aaPredicted RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 TRNAU1APQ9NX07 287 aaKnown RBP6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 RWDD2AQ9UIY3 292 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 VPS4AQ9UN37 437 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 ST14Q9Y5Y6 855 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 ICE1Q9Y2F5 2266 aa6.88□□□□□ -1.31
NPIPB3-203ENST00000504841 TTC24A2A3L6 582 aaPredicted RBP6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 ARHGAP42A6NI28 874 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 TTLL8A6PVC2 850 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 F8VZ95 297 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 DFFAO00273 331 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 PRAMEF11O60813 436 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 KATNA1O75449 491 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 GFPT2O94808 682 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 MAP3K6O95382 1288 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 CPP00450 1065 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 HOXC4P09017 264 aaPredicted RBP6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 KRT3P12035 628 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 MMP8P22894 467 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 RFC1P35251 1148 aaPredicted RBP6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 TRIM23P36406 574 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 DLSTP36957 453 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 ADCY8P40145 1251 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 ETV3P41162 512 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 CD97P48960 835 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 PAPOLAP51003 745 aaKnown RBP6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 SCNN1BP51168 640 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 GPLD1P80108 840 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 MC2RQ01718 297 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 FOXM1Q08050 763 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 ABHD18Q0P651 414 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 MAN2A1Q16706 1144 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 CAPRIN2Q6IMN6 1127 aaKnown RBP6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 CEACAM20Q6UY09 585 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 HSD11B1LQ7Z5J1 315 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 TMEM135Q86UB9 458 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 CCDC13Q8IYE1 715 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 ESX1Q8N693 406 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 SSC4DQ8WTU2 575 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 NCSTNQ92542 709 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 RNF166Q96A37 237 aaPredicted RBP6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 ECHDC3Q96DC8 303 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 ELMO2Q96JJ3 720 aa6.87□□□□□ -1.31
NPIPB3-203ENST00000504841 COQ10AQ96MF6 247 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms